Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01052 ATGAGGGTCCTACCTCCTACCTTATTCTGTGATAGTGGCACCGGAGATGAAGATAGGCTCCAGGCGAGGTTGGACAGAGACAGGAACCCACAAAAGGTAGATAGAGAACGTAGGGGAAGCCAGAAACGAATAACAGAAATGGGGCTTGGTGTTCCGGCGCCGCAACCAGTAGCAAGCAGCAAGAGCAGTGACTTTCTCTGTCTTTATCGTTGCGCTCCTGGTGACTGTGATTTTCCCAGGAGAACGAATCTACAGGTTGATCTGCTGCTTAGAGCACTTGACTCAGGATGGCATCGAGATTCTGGACCCAGTGACACTGAGGAGGAGGAGAGCGATCTTGATGAAGAAATTGATAACGTTGATGATCATGCTATGCAAGATACTGCTAAAAGCAAATACTTACAGACGAATGATAGTGATAGTGATGATTCTGATGGCCAGAAGCGTGTTGTTAGGTCAGCAAAAGACAAACGGTTTGAGGAGATGTCTTCTACAGTGGACCAGATGAAGAATGCAATGAAAATTAATGATTGGGTGAGCTTGCAAGAGAGCTTTGATAAGATCAATAAACAACTTGAGAAAGTTATGCGTGTCACCGAGTCTGAGAAGGTCCCCACACTTTACATTAAGGCACTTGTGATGTTGGAAGACTTCTTATCTGAGGCTTTGGCAAATAAGGATGCCAAAAAGAAGATGAGTAGTAGCAATGCAAAAGCCTTGAACTCAATGAAGCAGAAACTGAAGAAGAACAATAAGCAGTATGAGGATTTGATTAATAAATATAGGGAGAATCCTGAGAGTGAGAAGGAAAAAGATGAAGAGACAGAGGAGGATGAGGAAAGTGAAGCTGAAGAGATAATTGAGCCTGACGATATCAAATCAGAATATGACAGCGACGAGCCTGGAGATGATAAAGAAGATGCAAATGAGGGCCCTTGGGATCACAAGCTTAGCAAGAAAGACAGGCTTATGGATAAACAGTTCATGAAGGACCCTAGTGAGATCTCTTGGGAAATGGTAAACAAGAAGTTCAAAGAGATTGTGGCAGCTAGGGGTAGGAGGGGAACTGGGAGATTTGAACAGGTTGAGCAGCTGACCTTCTTAACCAAAGTTGCTAAGACACCTGCACAGAAGCTGCAAATTCTTTTTAGTCTTGTTTCTGCTCAATTTGATGTTAATCCAGGTCTCAATGGGCATATGCCTATACATGTTTGGAAGAAATGTGTACAGAATATGCTGGTCATTCTTGATATTCTGGAGGGGTATAGGAACATTGTCGTTGATGATTCTGTAGAGCCAGATGAGAGTGAAACCCAGAAGGGGCCAGACCATAATGGGCCAATTCGGGTTTGGGGGAATTTAGTTGCTTTTCTAGAAAGGATAGATGCTGAGTTTTTTAAGAGCTTGCAATGTATAGATCCTCATACTCGTGATTATGTTGAGAGATGCAGGGATGAGCCCATCTTTTTGATTCTTGCTCAGAATGTCCAGGAGTACCTAGCAAGGGTTGGAGATTTCAAAGCTGCTTCTAAAGTGGCCTTGAAGAGGGTTGAACTCATCTATTATAAACCACAAGGGGTTTATGATGCCATGAGAAAATTGGCTGAGCTGACTGAAAATGGAGATAGTGGAGAAGCTAGTGAGGAGCCAAAAGGTTTTGAGGACCCAAGGATTCCTGCTCCATTTGTTGTTACTCTTGAGATTGTGCCACGGAAACCTACTTTTCCAGAGAATAGCAGGACTCTAATGGATGTGTTGGTGTCCCTGATATATAAATACGGGGATGAGCGTACTAAAGCACGTGCAATGCTTTGTGATATATATCACCATGCTCTTCTTGATGAATTCTCAACAGCTCGCGATATGCTGCTTATGAGTCATTTGCAAGATGGCGTTCAACTAATGGACATTTCATCACAGATACTTTTTAACCGGGCTGTGTCGCAGCTGGGTTTGTGTGCTTTTCGGGTTGGATTGATTTCTGAAGCACATGGTTGTCTCTCCGAACTTTATTCTGGTGGAAGGGTGAAGGAGCTTCTTGCTCAGGGTGTCTCACAAAGTCGGTATCATGAGAAGACTCCAGAACAGGAAAGGATAGAAAGGAGACGTCAAATGCCATATCATATGCACATAAATCTTGAGCTCTTGGAGTCCGTGCATCTTATATGTGCTATGCTTCTGGAAGTCCCCAATATGGCAGCCAATGTGCATGATGCAAAGCGCAAGGTCATTAGTAAGACCTTCAGGCGCTTGCTTGAGGTCAGCGAAAAGCAAACATTCACGGGTCCCCCTGAAAATGTCAGAGATCACGTGATGGCTGCGACAAGGGCTCTTAGCAAGGGAGATTTTCATAAGGCTTTTGATGTTATCAAGTCCCTTAATGTATGGAAGTTTGTTAGAAATCGTCATACAGTACTGGAGATGCTGAGAGACAAAATTAAGGAGGAAGCATTGAGGACGTACCTCTTTACCTTCGCTTCATCTTATGATTCTCTGAGCCTTGAACATCTAACCAAAATGTTTGACCTATCTGTCGGTCACACTCATAGCATAGTTAGTAGGATGATGATCAATGAGGAGGTCCATGCAAACTGGGACCAGCCAAGTGGGTGCATTGTTTTCCAGGATTTTGATCAGTCCAGGTTACAGGCGTTAGCATTCCAGTTGACTGAGAAATTATCCATCATTGCCGAGAGTAATGAAAGGGCATTAGAGGCAAGAATAGGTGGTGGTGGATTGGATCTCCCTCTAAGGCGTAGAGATGGCCAGGACTACGCTGCCGCTGCTGCTGCTGGTGGAACAGCTCCATTGGGTGGTAGATGGCAAGAATTATCCCATACTCAGCAAAGGCAAGGCAGTGGTGCGGGACGGACAGGATATATTAGTGGTGGAAGGCCGTTTGCGTTGGGCCAGGCAGCTGGGAGTGGAAGGGATCGAACAGGGCGAGGAGCAGGTGCAGGCTATCAGACTGGTTATGGAGGTTCGGGGAGGAATACTCAAAGTAGTTCAGGAATGAGGGGTTCCCAGGTAGATATATCTACTCGTATGGTTAGTCTGAAGGGAGTTCGAGCTTGAATAGAAGATATAGGGAGCTCTGTGTTTTGATATTGCGGCTGAGTCACTATAATATAGTCTCTTCTATTAGTGAGTTTTTATTTTTCCACCTTTCTATTTGGTTATGTATTTGATATAAAATCAAAACGACTGGCAGTTGCTATTGGAGCTTGACTTCATTTCTTTTCTTGTGTCATGTCGCAATTAGTTTAAATTGATTCTAATAATG 3283 0.4405 MRVLPPTLFCDSGTGDEDRLQARLDRDRNPQKVDRERRGSQKRITEMGLGVPAPQPVASSKSSDFLCLYRCAPGDCDFPRRTNLQVDLLLRALDSGWHRDSGPSDTEEEESDLDEEIDNVDDHAMQDTAKSKYLQTNDSDSDDSDGQKRVVRSAKDKRFEEMSSTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLSEALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYRENPESEKEKDEETEEDEESEAEEIIEPDDIKSEYDSDEPGDDKEDANEGPWDHKLSKKDRLMDKQFMKDPSEISWEMVNKKFKEIVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLQILFSLVSAQFDVNPGLNGHMPIHVWKKCVQNMLVILDILEGYRNIVVDDSVEPDESETQKGPDHNGPIRVWGNLVAFLERIDAEFFKSLQCIDPHTRDYVERCRDEPIFLILAQNVQEYLARVGDFKAASKVALKRVELIYYKPQGVYDAMRKLAELTENGDSGEASEEPKGFEDPRIPAPFVVTLEIVPRKPTFPENSRTLMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDMLLMSHLQDGVQLMDISSQILFNRAVSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELLESVHLICAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALSKGDFHKAFDVIKSLNVWKFVRNRHTVLEMLRDKIKEEALRTYLFTFASSYDSLSLEHLTKMFDLSVGHTHSIVSRMMINEEVHANWDQPSGCIVFQDFDQSRLQALAFQLTEKLSIIAESNERALEARIGGGGLDLPLRRRDGQDYAAAAAAGGTAPLGGRWQELSHTQQRQGSGAGRTGYISGGRPFALGQAAGSGRDRTGRGAGAGYQTGYGGSGRNTQSSSGMRGSQVDISTRMVSLKGVRA 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01052 1024 MobiDBLite consensus disorder prediction 95 164 - -
Bach8g01052 1024 Coils Coil 237 264 - -
Bach8g01052 1024 MobiDBLite consensus disorder prediction 966 1012 - -
Bach8g01052 1024 MobiDBLite consensus disorder prediction 992 1012 - -
Bach8g01052 1024 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 808 896 IPR000717 -
Bach8g01052 1024 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 136 739 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bach8g01052 1024 ProSiteProfiles PCI domain profile. 707 879 IPR000717 -
Bach8g01052 1024 MobiDBLite consensus disorder prediction 226 319 - -
Bach8g01052 1024 MobiDBLite consensus disorder prediction 136 164 - -
Bach8g01052 1024 SUPERFAMILY "Winged helix" DNA-binding domain 805 878 IPR036390 -
Bach8g01052 1024 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 97 959 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bach8g01052 1024 MobiDBLite consensus disorder prediction 270 307 - -
Bach8g01052 1024 MobiDBLite consensus disorder prediction 1 58 - -
Bach8g01052 1024 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 97 1019 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bach8g01052 1024 MobiDBLite consensus disorder prediction 248 269 - -
Bach8g01052 1024 MobiDBLite consensus disorder prediction 16 43 - -
Bach8g01052 1024 Pfam PCI domain 747 875 IPR000717 -
Bach8g01052 1024 MobiDBLite consensus disorder prediction 106 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01052 Bach-Chr8 7003528 7010127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01052 108 1024 Eukaryotic Initiation Factors Gene Family AT3G56150 67.028 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01052 K03252 - gmx:100779751 1404.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g01052 8 7003528 7010127 Bach8g01052 8 7003528 7010127 ECH