Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01049 ATGATGAGAGCTCCATGCGGGAGCTGGGAGCTGAGGGTAAGAGAAAGCAGCCGCCCCTTTCTCTCCCATTCTTGGTGTTTGTTCCTGCTTCTCAGGATGGAGTCTCAGGTGAAGCATGCTGTGGTTGTTAAGGTTATGGGTCGTACTGGATCCAGAGGGCAGGTGACTCAGGTGAGGGTGAAGTTTCTGGATGATCAGAACCGTTATATTATGAGGAATGTGAAAGGACCGGTGAGAGAAGGAGACATCCTTACCCTGCTTGAGTCTGAAAGAGAAGCAAGGAGGTTGCGTTAG 294 0.5068 MMRAPCGSWELRVRESSRPFLSHSWCLFLLLRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESEREARRLR 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01049 97 Hamap 30S ribosomal protein S28e [rps28e]. 33 97 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bach8g01049 97 PANTHER 40S RIBOSOMAL PROTEIN S28 33 97 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bach8g01049 97 ProSitePatterns Ribosomal protein S28e signature. 88 96 IPR028626 -
Bach8g01049 97 FunFam 40S ribosomal protein S28 32 97 - -
Bach8g01049 97 SUPERFAMILY Nucleic acid-binding proteins 33 97 IPR012340 -
Bach8g01049 97 Gene3D - 32 97 IPR012340 -
Bach8g01049 97 Pfam Ribosomal protein S28e 36 96 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bach8g01049 97 CDD S1_S28E 38 97 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01049 33 97 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 90.769 1.39e-36 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01049 K02979 - oeu:111370442 105.916