Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach8g01048 | ATGGCGGCAGCAGCAGTAGTGGCGAGTGTAGATCCAACCCAACTTGCCGTTGAAGTGAAGCTCTTCAACAGGTGGAGTTTCGATGACGTTCAGGTTACTGACATTTCTCTGGCTGACTATGTTGGAGTGGTGCCATCCAAGCATGCAACCTATGTTCCTCACACTGCTGGTAGGTACTCAGTCAAGCGTTTCAGAAAGGCCCAGTGTCCAATAGTTGAGAGGCTCACCAACTCTCTGATGATGCACGGTAGAAACAATGGGAAGAAACTAATGGCTGTGAGAATTGTCAAACATGCTATGGAAATTATTCATTTGTTGACTGAGCTGAATCCCATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGCGAAGATGCTACTCGAATTGGCTCAGCTGGAGTCGTTAGGAGACAGGCAGTTGATATTTCACCCCTTCGTCGTGTGAATCAGGCCATCTATCTTCTAACAACCGGTGCACGGGAAGCTGCTTTCAGAAATATTAAGACAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCGGCAAAAGGTTCATCAAACAGCTACGCTATCAAGAAAAAGGATGAGATTGAGAGAGTTGCCAAGGCCAATCGTTAAGCGGCCAATGGAAGTAGCTTTAAAGATTTTGTTTCTCTCGTTGTAGTTCATTCATTCACTTCCTTAATTTTGAATATGGTCTAATACTATACTTTGTGCTTCTTTAGTTCCTTTTTTGCTGTTCTCCTCGAGGGGTTCACCTGTTCTGATCGATATTTGTTACTTGTAAACTTTAGTGCTTAATAGATCGCG | 816 | 0.4338 | MAAAAVVASVDPTQLAVEVKLFNRWSFDDVQVTDISLADYVGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTELNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach8g01048 | 207 | CDD | uS7_Eukaryote | 20 | 207 | IPR005716 | GO:0003735|GO:0006412|GO:0015935 | |
| Bach8g01048 | 207 | PIRSF | RPS7p_RPS7a_RPS5e_RPS7o | 1 | 207 | IPR000235 | GO:0006412 | |
| Bach8g01048 | 207 | Pfam | Ribosomal protein S7p/S5e | 61 | 207 | IPR023798 | - | |
| Bach8g01048 | 207 | PANTHER | RIBOSOMAL PROTEIN S7 | 4 | 207 | IPR000235 | GO:0006412 | |
| Bach8g01048 | 207 | Gene3D | Ribosomal protein S7 domain | 2 | 207 | IPR036823 | - | |
| Bach8g01048 | 207 | SUPERFAMILY | Ribosomal protein S7 | 20 | 207 | IPR036823 | - | |
| Bach8g01048 | 207 | ProSitePatterns | Ribosomal protein S7 signature. | 73 | 99 | IPR020606 | GO:0003723|GO:0003735|GO:0006412 | |
| Bach8g01048 | 207 | FunFam | 40S ribosomal protein S5 | 3 | 207 | - | - | |
| Bach8g01048 | 207 | NCBIfam | 30S ribosomal protein S7 | 18 | 207 | IPR005716 | GO:0003735|GO:0006412|GO:0015935 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach8g01048 | Bach-Chr8 | 6985424 | 6988031 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach8g01048 | 1 | 207 | Cytoplasmic Ribosomal Protein Gene Family | AT2G37270 | 89.372 | 2.69e-139 | 386 |