Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01013 CTTCCCTCTTGTGTACAGTGTGCGCTTTTGCTTCAACTTGTCCCGACATGGTTCCAACCTAATGGGGTTTCTCTGCTGCTACTCCTTCCTCTAAGACACATACGAACTTGTTTACACAAACGAAATAAACTTGGAAATCATCCTTTGGGGATAATTTTGGAGGGTCTATATGGCTATGCAATCTTTCTCTTTCAAGGAACATGAAGGTATTGTCCAAAATTCTGTGGGACAGTTGTCTACATCTTCAGGCACCTGGTGGAATGCCTTTGGATCTCGATCAATTTATGGGGAGTCCTATGGCCCAGTCAGGACTTTCTCATTGGAGCTTCCCAACTATGTAGACCAACTTGCTGCCACTCCCAATAAGCCAGCAGGGAGAGAAGCTGAACAACTGTTTGATAAAGGACATACAACTAAGTTCACTATCTTTCCAGATGATTGTAAAATGACAGGTGATGCACAAAAACCTCATACAGCCATATCCCTGCAATCATCAGTTCCCGATTCTCGCGCTCGTTATGAGCTTGCTTTCAGTCAGCCTATGATCTGTGCAAAATATCCTCATATGGATCAATTTTATGGGCTCTTCTCAACTTATGGACCTCAAGTTTCGGGACGTATAATGCTACCACTTAACTTGACATCCGATGATGGACCAATTTATGTGAATGCTAAGCAGTACCATGGAATCATCAGACGTCGGCAATCGCGTGCAAAGGCTGTACTGGAGAATAAAGTGACAAAACGTGGCAAGCCCTATATGCATGAATCACGCCATCTCCATGCAATGCGTCGGCCGAGAGGATGTGGTGGTCGTTTCTTGAACACAAGGACAGAGAATTTGAACAATGAAAATGGTAAAAGTGGACGCGAAGTGAATAGAACTGGTAAATGGCCACTGCAGTCCAGTGGTTCTCAGAGTTCTGAAGTGCTACAATCTGAATGTGGAACTTTGAACTCATCAAAGGAAACCAGTGGCGGCAGTCCAAATATTTCAGGGTCAGAGGTCACAAGCAGCATGTATTCAAGGGGAGGTCTTGATAGCTTTACAGTCAATCATCTTGGATCAACTGTGCATTCTCTAGCAGACATGTTAGATGGTGGGCGTGGCATCGTTATGCCCACAAAGTGGGTTGCAGCGGGTGGTAACTGCTGCAACCTTAACGTTTGATTGGCAAGGGAACAAGTGGGCTTGGCACAATGTTGTGCCAAACCCCATCCTTGCTGTGACCAGATGAAGAAGCATTGTTCCAGTTTCATGTGTTACTGCGACAAGTTTCGTTGTGGTGGCTTGCCCCAACATCTGGTTTGAAGGCAAATCATTCTTGGCTCAGTCTTATTCGAAAGGCAAATCATCCTTGGCTCAATTTAACTACAGTAATACTAGTGTCTCTGTCTTTCTGCACATGCCTGTCTTGGCTTGGTTAGACATGCTAATGACTTGATATCCTGATGCAGTAGACTATAATGCGTCTGTTTCTGTGTTAAAAATAAAAAAGCACCAAACTTTAGTTATATCTGTGCTTTTAATAATTTCTAAGCGTGTTGTTGTATTCTGGATTTCTAACTTTGTGGTGCAATGTATCATAGAACTTTGCCCTGTGATCTTTATTAGAAAAATAAAGCATTGGTCTGTA 1637 0.4325 MAMQSFSFKEHEGIVQNSVGQLSTSSGTWWNAFGSRSIYGESYGPVRTFSLELPNYVDQLAATPNKPAGREAEQLFDKGHTTKFTIFPDDCKMTGDAQKPHTAISLQSSVPDSRARYELAFSQPMICAKYPHMDQFYGLFSTYGPQVSGRIMLPLNLTSDDGPIYVNAKQYHGIIRRRQSRAKAVLENKVTKRGKPYMHESRHLHAMRRPRGCGGRFLNTRTENLNNENGKSGREVNRTGKWPLQSSGSQSSEVLQSECGTLNSSKETSGGSPNISGSEVTSSMYSRGGLDSFTVNHLGSTVHSLADMLDGGRGIVMPTKWVAAGGNCCNLNV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01013 333 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 79 285 IPR001289 GO:0003700|GO:0006355
Bach8g01013 333 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 163 217 IPR001289 GO:0003700|GO:0006355
Bach8g01013 333 Gene3D - 160 222 - -
Bach8g01013 333 SMART cbf3 159 220 IPR001289 GO:0003700|GO:0006355
Bach8g01013 333 MobiDBLite consensus disorder prediction 209 283 - -
Bach8g01013 333 MobiDBLite consensus disorder prediction 219 283 - -
Bach8g01013 333 ProSiteProfiles NF-YA/HAP2 family profile. 160 220 IPR001289 GO:0003700|GO:0006355
Bach8g01013 333 PRINTS CCAAT-binding transcription factor subunit B signature 163 185 IPR001289 GO:0003700|GO:0006355
Bach8g01013 333 PRINTS CCAAT-binding transcription factor subunit B signature 194 217 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01013 Bach-Chr8 6772445 6776831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01013 20 331 CCAAT-HAP2 Transcription Factor Family AT3G05690 42.638 1.11e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach8g01013 CBFB_NFYA 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01013 K08064 - gmx:100527677 459.914