Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01012 CTCATTCTCAGCAACTTTCTATGATGCTTCCTCTTAGTATTTTTCTTTTCTTGTCCAGGAAAAAAGAAGGACATTTCCCATTATCCCTGTTGTCCTAGTCTCCCTTCGAGTCTTTGACCTGGGCGTACTCCAGAAGTTCAACCGGCCACCAATTTGACCATTCTCCCCCACTTCAACCTACCATTTTAAAAACCTCAAAATCAACGTTTAAACACAACCGTTCGCTCAATATATGCTCATTAAGATTCTGTAATCTCGTTTCTTTCCTCAAAATTCTCACTTTTCTGCATTCTCTGTTTTGGTTTTCGGCGAATCTTGAAACATGAACGACTTGTTTTCCGGCTCCTTCTCCCGCTACCGTGACGGACAAGTCTCACCGGATCACCATGTGATCGAGATGACAGGCACAACGACGTCCTCGGGCTTAAACCTGGACAAGTTCTTCAAAGAAGTGGATTCGATTAAGGATGAGTTGAAGGAGCTGGAGCGGCTGAACCAGAGCCTGCGCAACTCTCATGAACAGAGCAAGACACTTCACAACGCCAAGGCTGTGAAGGACCTTCGTTCTCGTATGGACGCCGACGTTGCTCTCGCCCTCAAGAAAGCCAAGCTCGTTAAGCTCCGACTGGAGGCGCTCGACAAATCCAATGAAGAAAACCGGAGCATGCCCGGCTGCGGACCCGGCTCATCTTCGGATCGTACTCGGACCTCCGTGGTCAGCGGGCTAAGGAACAAGTTGAAAGACTCGATGGATAGCTTCAACACTCTCAGACAACAGATATCCACGGAGTACAGGGAGACCGTACAACGTAGGTACTACACTGTCACCGGCGAAAACCCTGATGATAAAACCATTGACCTCCTCATTTCCACCGGTGAAAGTGAAACTTTCTTACAGAAGGCAATCCAACAGCAAGGGAGAGCTACCATTATGGACACCATACAAGAGATTCAAGAGAGACATGATGCAGTGAAAGAGATGGAGAGAAATCTGAATGAGTTGCACCAAGTGTTCTTGGACATGGCAGTTCTGGTGCAAGCCCAAGGCGAACACTTGAATAATATAGAGAGCCACGTGGAAAGAGCTAATTCGTATGTAAGGGATGGGGTCCATCAGTTGCATGTTGCAAGAAAGCACCAGAAAAACACCCGGAAATGGACCTGTATTGCCATTATCCTGCTGCTAATCATAATCTTAGTTATAGTGCTTCCAATTGTTCTAAGAAACTGAGATTATCCAATGAGTTTAGACACCTATGAGGGTGGACTAGATCAAAGCTTTAAATTAAATAGTCAAGTCAACTTAGGCGTCTTTGACCGTTGGATTGAAAATGCCTTTCTTTTGTAATTCTTTTTTTTTTTTTTTTTTTGTGAGGTGTTTTGAGTTTTGAGACTTCAAACTGTGAGATGTTTCGTTTGTGAAACTAGAAGCTGGTGGGGGGCACCTGTCGCTGTTGATATATTATTTGCAGGGTATCCTTAGACCTTCATCTTTCTATACACTTTTCTTTTTGTGTACAATAGCTTGTCTTCGAAAATTTCAAGTGATACAAGTGAATAAAAT 1564 0.4412 MNDLFSGSFSRYRDGQVSPDHHVIEMTGTTTSSGLNLDKFFKEVDSIKDELKELERLNQSLRNSHEQSKTLHNAKAVKDLRSRMDADVALALKKAKLVKLRLEALDKSNEENRSMPGCGPGSSSDRTRTSVVSGLRNKLKDSMDSFNTLRQQISTEYRETVQRRYYTVTGENPDDKTIDLLISTGESETFLQKAIQQQGRATIMDTIQEIQERHDAVKEMERNLNELHQVFLDMAVLVQAQGEHLNNIESHVERANSYVRDGVHQLHVARKHQKNTRKWTCIAIILLLIIILVIVLPIVLRN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01012 302 SMART tSNARE_6 202 269 IPR000727 -
Bach8g01012 302 Coils Coil 207 230 - -
Bach8g01012 302 FunFam Syntaxin 132 200 300 - -
Bach8g01012 302 SUPERFAMILY t-snare proteins 35 262 IPR010989 GO:0016020|GO:0016192
Bach8g01012 302 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 207 269 IPR000727 -
Bach8g01012 302 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 34 164 - -
Bach8g01012 302 Pfam SNARE domain 245 295 IPR000727 -
Bach8g01012 302 CDD SynN 37 194 IPR006011 GO:0016020
Bach8g01012 302 CDD SNARE_syntaxin1-like 206 266 - -
Bach8g01012 302 Gene3D - 196 300 - -
Bach8g01012 302 Pfam Syntaxin 39 242 IPR006011 GO:0016020
Bach8g01012 302 SMART SynN_4 32 158 IPR006011 GO:0016020
Bach8g01012 302 Gene3D - 35 167 - -
Bach8g01012 302 ProSitePatterns Syntaxin / epimorphin family signature. 213 252 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach8g01012 302 MobiDBLite consensus disorder prediction 108 129 - -
Bach8g01012 302 MobiDBLite consensus disorder prediction 115 129 - -
Bach8g01012 302 Coils Coil 37 71 - -
Bach8g01012 302 PANTHER SYNTAXIN 54 290 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01012 Bach-Chr8 6768605 6770265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01012 31 281 SNARE and Associated Proteins AT3G11820 72.510 4.69e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01012 K08486 - jre:108982862 448.743