Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g01011 ATGAATGACTTGTTCTCCGGTTCCTTCTCCCGCTTCCGTAGCGAGGAAGCGTCGCCGGGACGGGACCACCATGTCATAGAGATGAGTGCCGCGACGGCGTCCACCGATGGAGTCAATCTCGACAAGTTCTTCGGAGATGTGGAATCGATCAAGGAGGAGCTCCAGGAGCTGGAGCGCCTCAACCGGAATCTCCTTAACTCTCACGAGCATTACAAGACACTCCACAATGCCAAGGCCGTGAAGGACCTTCGCTCTCGCATGGACAACGATGTTGGCCTTGCTCTCAAGAAGGCGAAAATCGTCAAGGTCAAATTGGAGGCTCTCGAGCGATCCAACGCCGCCAACCGGAGTGTTCCTGGTTGCGGACCCGGTTCATCATCGGACCGTACACGCACCTCCGTGGTCAATGGTTTGAAGAAGAAGCTAAAGGACTCCATGGAGAGCTTCAATAACCTCAGGCAGCAGATCTCGTCGGAATATCGGGAGACCGTACAGCGTAGGTATTACACCGTCACCGGCGAGAATCCAGATGAGAAGACCATCGACCTCTTGATCTCTACAGGTGAGAGTGAGACCTTCCTTCAGAAAGCCATCCAAGCACAAGGTAGAGGTAGCATTCTGGACACCATTAATGAAATTCAAGAAAGGCATGATGCAGTGAGAGAGATTGAGAAGAACCTCAAAGAGTTGCATCAAGTGTTCCTTGACATGGCAGTATTGGTGGAAGCACAGGGTGAGCAATTGGACGATATCGAAAGCCATGTTGCAAGAGCAAACTCTTTTGTCAGGACTGGAGCACAGCGGTTGCAGGTTGCAAGGAAGCACCAGAAGAACACCAGGAAATGGACTTGTTATGCTATAATACTTCTGCTGGTGATCATCTTATTTGTGGTGCTCTTCACTGTGAGACCATGGGAAAATAATGGTAATGGTGGCAACAATAATAGTCAACCAGCAACCTCTCCTCCTCCTCCTCCTGCAGCTTAA 987 0.5066 MNDLFSGSFSRFRSEEASPGRDHHVIEMSAATASTDGVNLDKFFGDVESIKEELQELERLNRNLLNSHEHYKTLHNAKAVKDLRSRMDNDVGLALKKAKIVKVKLEALERSNAANRSVPGCGPGSSSDRTRTSVVNGLKKKLKDSMESFNNLRQQISSEYRETVQRRYYTVTGENPDEKTIDLLISTGESETFLQKAIQAQGRGSILDTINEIQERHDAVREIEKNLKELHQVFLDMAVLVEAQGEQLDDIESHVARANSFVRTGAQRLQVARKHQKNTRKWTCYAIILLLVIILFVVLFTVRPWENNGNGGNNNSQPATSPPPPPAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g01011 328 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 37 167 - -
Bach8g01011 328 Coils Coil 40 74 - -
Bach8g01011 328 FunFam Syntaxin 132 203 303 - -
Bach8g01011 328 SUPERFAMILY t-snare proteins 38 265 IPR010989 GO:0016020|GO:0016192
Bach8g01011 328 Coils Coil 210 230 - -
Bach8g01011 328 MobiDBLite consensus disorder prediction 307 328 - -
Bach8g01011 328 Coils Coil 135 159 - -
Bach8g01011 328 CDD SynN 40 197 IPR006011 GO:0016020
Bach8g01011 328 Gene3D - 206 303 - -
Bach8g01011 328 PANTHER SYNTAXIN 49 294 IPR045242 -
Bach8g01011 328 SMART tSNARE_6 205 272 IPR000727 -
Bach8g01011 328 CDD SNARE_syntaxin1-like 209 270 - -
Bach8g01011 328 ProSitePatterns Syntaxin / epimorphin family signature. 216 255 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach8g01011 328 MobiDBLite consensus disorder prediction 1 21 - -
Bach8g01011 328 Pfam SNARE domain 246 298 IPR000727 -
Bach8g01011 328 SMART SynN_4 35 161 IPR006011 GO:0016020
Bach8g01011 328 Pfam Syntaxin 42 245 IPR006011 GO:0016020
Bach8g01011 328 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 210 272 IPR000727 -
Bach8g01011 328 Gene3D - 38 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g01011 Bach-Chr8 6764879 6766424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g01011 28 328 SNARE and Associated Proteins AT3G11820 71.935 8.94e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g01011 K08486 - qsa:O6P43_006031 499.204