Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00955 ATGCCGGGGACAAGAGAGAGTGATGGAGCTGCCTGTAATCCAGAGTCACCTGAGAATGGTCCTGAAAAACCTACTAATTCCGAAGAGCAGGTAAACCTTGATGATGACAACGATCAAGAGGAGACAATGGAGGAAGAAATTGAGTATGAAGAAGTAGAAGAGGAAGAAGAAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGTTGTAGACGAAGAGGATGAGGAGGATAAAGGGGCTGCTAATGGAGAATATGAGGAGATGAAAGTTGCTGACACTGAGGATGAAGACGAGAAAAAGAAGCATGCAGAGCTTCTTGCCCTTCCACCTCATGGATCAGAGGTTTACCTTGGTGGTGTTCCTCACAACGTTTCTGAAGATGATTTGAAGAGTTTTTGTGAATCTATAGGAGAAGTCTCAGAGGTTAGGATTATGAAAGGGAAAGAATCAGGTGAAGCAAAAGGTTATGCTTTTGTGACCTTCAGGACAAAAGAGCTGGCTTCTAAGGCCATTGAGAAGTTGAATAATTCTGAAATTAAGGGGAGAAAAATAAAGTGCTCAACATCTCAAGCAAAGAATAAGTTGTTCATTGGTAATGTTCCAAGAAATTGGACACCAGAAGATATGAAGAAGGCTGTAACAAAAATTGGACCTGGAATCAATTCTGTGGAATGGTTGAAGGACCCACAGAATTCCAGCCGTAATCGGGGATTTGCTTTTATTGAGTATTACAATCATGCTTGTGCAGAATATTCAAGGCAGAAGATGTCAAACCCAAAATTTAAACTTGATAACAATGCTCCTACAGTGAGCTGGGCTGACCCTAAGAATTCTGACTCATCTGCTGCCTCACAGGTAAAGGCAGTATATGTCAAGAATCTACCAGAAGACATTACTCAGGATCGTCTTAGAGAACTGTTTGAACATCATGGGAAGATTACAAAAGTGGTTCTCCCTCCTGCAAAAGCAGGACAGGAGAAGAGCAGATTTGGTTTTGTTCACTTTGCTGACAGGTCAAGTGCCATGAAGGCCTTGAAGAATACTGAGAAGTATGAAATTGATGGCCAAATTTTGGAATGTTCACTTGCAAAGCCCCAAGCAGATCAGAAGTCATCTGGGCTGCCAAATTCACAGAAGCCTGTTGCACTTCCAACTTACCCTCCTCGTCTTGGTTATGGCGTAGTTGGGGGTGCTTATGGTGCTGTGGGTGCAGGATATAGCGCTGCAGGCTTGACACAACCAATGATGTATGGTAGGGGAGCAACTCCTGCTGGCATGGCAATGATGCCAATGCTTTTACCAGATGGAAGAATTGGATATGTATTACAACAACCTGGGTTGCAACCTCATTCCCCTCAACCATCACCCCGGGGTGGTAGGAATAGTGGTGGTAGATCAAGTGGTGGGAAACGTGCTAACGTTAATAACCGTGGGCGTGGCCGATATAATCCTTACTAACCTGGACATCAATAAACAGAGAAACTTAGGATAATTACATGTCTGGATGGAGAAAAATGAGCTTCGTGGAAGATCGAAGTCCAGGGTGATCCATATTGGAACGATCTTTGTTGTTTTTAATGGTGAAATGGTAGATTAATTCCGAAATGAATAGATGTATATATTTTTGGATATGGTCAAAGTTCCCATCTTATGCTTGTCTTTTCCCTTATTCTTGGAAGTAAATTTTAAATCCTTGGAATTATTTATAGATCGGTTGTCCAAAAAGAATGCTTTCATCTTAAACTAATGAAAAGCTTAGGTTTTAT 1769 0.4211 MPGTRESDGAACNPESPENGPEKPTNSEEQVNLDDDNDQEETMEEEIEYEEVEEEEEEEEEEEEEEEEEVVDEEDEEDKGAANGEYEEMKVADTEDEDEKKKHAELLALPPHGSEVYLGGVPHNVSEDDLKSFCESIGEVSEVRIMKGKESGEAKGYAFVTFRTKELASKAIEKLNNSEIKGRKIKCSTSQAKNKLFIGNVPRNWTPEDMKKAVTKIGPGINSVEWLKDPQNSSRNRGFAFIEYYNHACAEYSRQKMSNPKFKLDNNAPTVSWADPKNSDSSAASQVKAVYVKNLPEDITQDRLRELFEHHGKITKVVLPPAKAGQEKSRFGFVHFADRSSAMKALKNTEKYEIDGQILECSLAKPQADQKSSGLPNSQKPVALPTYPPRLGYGVVGGAYGAVGAGYSAAGLTQPMMYGRGATPAGMAMMPMLLPDGRIGYVLQQPGLQPHSPQPSPRGGRNSGGRSSGGKRANVNNRGRGRYNPY 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00955 486 Gene3D - 277 401 IPR012677 -
Bach8g00955 486 SMART rrm2_1 115 188 IPR003954 GO:0003676
Bach8g00955 486 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 194 276 IPR000504 GO:0003723
Bach8g00955 486 MobiDBLite consensus disorder prediction 455 474 - -
Bach8g00955 486 Gene3D - 31 194 IPR012677 -
Bach8g00955 486 MobiDBLite consensus disorder prediction 83 100 - -
Bach8g00955 486 SUPERFAMILY RNA-binding domain, RBD 194 368 IPR035979 GO:0003676
Bach8g00955 486 Coils Coil 40 77 - -
Bach8g00955 486 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 196 262 IPR000504 GO:0003723
Bach8g00955 486 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 116 186 IPR000504 GO:0003723
Bach8g00955 486 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 290 357 IPR000504 GO:0003723
Bach8g00955 486 MobiDBLite consensus disorder prediction 443 486 - -
Bach8g00955 486 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 288 366 IPR000504 GO:0003723
Bach8g00955 486 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 14 472 - -
Bach8g00955 486 SMART rrm1_1 195 272 IPR000504 GO:0003723
Bach8g00955 486 SMART rrm1_1 289 362 IPR000504 GO:0003723
Bach8g00955 486 SMART rrm1_1 115 188 IPR000504 GO:0003723
Bach8g00955 486 MobiDBLite consensus disorder prediction 1 100 - -
Bach8g00955 486 MobiDBLite consensus disorder prediction 31 82 - -
Bach8g00955 486 SUPERFAMILY RNA-binding domain, RBD 110 193 IPR035979 GO:0003676
Bach8g00955 486 CDD RRM_SF 116 188 - -
Bach8g00955 486 Gene3D - 195 275 IPR012677 -
Bach8g00955 486 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 277 386 - -
Bach8g00955 486 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 114 192 IPR000504 GO:0003723
Bach8g00955 486 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 195 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00955 Bach-Chr8 6327854 6331248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00955 116 456 Eukaryotic Initiation Factors Gene Family AT4G34110 26.203 6.29e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00955 K13161 - qsa:O6P43_005954 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00955 8 6327854 6331248 Bach8g00955 8 6327854 6331248 ECH