Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00906 CGGAGGCGTCAGCACCTTATGGGTAGCTCCATTATTGAGGCCCTGAAAGCCTCTGTATCTGTCCCCTTTTCATTATTTATTTTTGGATCTCTTGGGATTAGGGTTTTCTTGCAATTCTCGTTGTACAATTGAGAATATCTTGTGTGAATTTTTATCCCTTAACTCTTGCTCGGTTTTGATAGAAAATTCTTGTGAGCAGGGACGCTATTTTGATTCTGTATTTTACTTCTGAATGTTTGCGACAGTAAATTAGGGTTAGGATTATGGTTTAGATTTGTGTGTGATAGACATGGAGAACTTACGTAGATCGTTTGATAGATCGAGGGAAGCTGGAGTAAAGAAACCCCGATTAACGGACGAACCCGAGCGCGTCCCAAATTCTAGTATACGACAGTTTCCTCAGCGACAAGTGGGTTCTGGGGTGAATACTTTTGCATCAGCAGCAAGGTTTAGAACGAACGATAGAGATTCCGAAAGCAGTGATTCGGGTCGTGGTGGATACCATCCTCAGCAGCCACTTCATCAAGAGCTTGTAACTCAGTATAAAACCGCCCTTGCTGAGCTGACTTTCAATTCGAAGCCCATAATTACCAACTTGACTATAATTGCAGGCGAGAACCTTTATGCAGCAAAGGCAATTGCTGCCACTGTCTGTGCTAACATTATAGAGGTTGCAAGTGAACAAAAGCTGCCATCTCTTTATCTTTTAGACAGTATTGTTAAGAATATTGGCCGGGATTACATAAAATATTTTGCTGCCAAACTGCCTGAGGTATTCTGCAAGGCATATAGGCATGTTGATCCTTCAGTCCATCAAAGTATGAGGCATCTTTTCGGAACATGGAAAGGAGTCTTTCCTCCTCCGACCCTTCAGATGATTGAGAAAGAGCTTGGCTTCAGTCCTGCAGTCAACGGTTCATCCTCCTCATCTACACTGAAGAGCAATTTGCCATCACAACGTCCACCTCATAGTATCCATGTGAATCCCAAGTATTTAGAAAGGCAACAACTTCAGCAGTCCACCAGGACTAAAGGAATAGCTAATGATATGACGGGAGCTATATCAAACTCAACTGAGAATGCAGAGAGGCCTGATAGAGCTGTGGGTGGTGGACGGCCTTGGACAGATCCCTCTGTTAACATACATAGCATTCAGCGGTCTCATAGAGATGCATTTAATGATTCCGTTCCTGAAAAGAGCACTCCTGCATCCTATGTAGGCAATGAATATAATTCTGATCTGTCTAAGAATTTGGGCTTGGGTGTTGGAAGAACTGGTGGTAGGGTTTCTGAGGTAGGATATGACAAAACTTGGTATAAAGCTGCTGGTGGTGGTGTTGCAGAAACAATAGCTGGCCAAAGGAATGGTTTTAATGTCAAGCATGGTCTGTTGAATCATGAAGGTCCTAAGTCCATGAATTTGGATGCAAACCATCAGACAATACAAAGCTTAACTAGCTTAAGAAGCAACGTGATGTCAAGTAGCTGGAAGAATTCTGAGGAAGAGGAGTTCATGTGGGATGGTATGAACTCTGGGTTGACTGATCGTGGTGCATCTAATATCCCTAGCAGCTTGAACAAAAATCATTGGACAGCTGATAATGAAAATTTGGAAGGTGAAGATAATCTTCCAATCCCTCGCCATTTTATGTCAAAGGTTGATCAAGAAACATCTACTGAAAAGAAACAACTACCTGCTTTTGGTCATCGTTCATCAGTATCTTGGCAATTGCAGGAGCAGCACTCAATTGATGAGCTGGATCGTAGGCCAGGTCACTCAGAAGGCTATGCATCCAATCTTGGTGATTTACCGACCAATCCTTTGGTCAGGATAGGGAATAGACCTTTCCTGCCAAATGCAACGACAGGGTCGGCAGGAATGGCTGCACAGCCACAATTTTCTATGAGAGCTGGCTCCCCTTCTGGGCAGTCACCTTTGAGACAACAGTCTCCATCACCTCCGGTGCCTATGCGCCATCCAACTAATCAATTGCGGAACATAGCTGAGGAAGACCGTACACAGAGTCTGAAAACATCTCAATTCTCTGGGAGTCTTCAAGGCAGACATTTTCGAGATCCATCACCTGCTCCTCCTCCTAAAGTTCAAGTCAGTAACTTGCGAAGGTCGCAGCAAAAGGATCCACGAATTCCATTATCTTCAGTGACTTCTTTTCCGCAAAGACACCACAGTGCACTTCTGCAGCAGCAGGAACTGGGCTCCTCTGACAGTGGAGTTTCTGATAAGACTGAGAAGCGACCCCAGTCTGAAGTTACTCTAGCTGCAGAAACTTCAAAACAGTCAACCACAAGTAGTTTGTTAGCTGCAGTTATGAAGAGTGGGATTTTCTCGAACAATTCAATTATCAGTAGTATACCTAATTTAAGTTTCTTGGATACAAAGAACTTGCCTTTGCAATCAGGGGTTCAGCCATCCCGCCCTGCTGGGTCTTCTACCTCACTAATTTCTTCAGGCCTCGGGGTTGCATCACCATCCTCTTTAGATCCTCCGAATGATGACTCATCTACTCTGCCAAATATATCTCAAGGAAAGGTTGGACAACCACCAAGGCCACCTCCTCAACGACCATATTCCTCTATTACTAGTAGTGCCTCGGCTCAGACCTCAAGTGACACCAATAGTACCTCAAATCCAATATCAAATCTTTTAAGCTCCTTAGTTGCGAAGGGGTTAATATCTGCTAAAACAGGGTCCACCTCTGAGGTGCTGGCTGAGATGCAGACACGATTGGAGGAACCAAGCCAGAGCGTTACTACTAGTACCTCCTTGCCAGTTGCTTCTTTTCCTGGTCCTGCAGCCATCCCTGAATCATCTACAGGAGATGATGTAAACCATGATGCGAAAAGCTCTGCAGCTATATCTCAATCAACTGCCACAGAAACAAGAAATCTCATTGGCTTTGAGTTTAAGCCTGACCTAATCCGAGAGTTGCATCCAGATGTAATCAGAGATCTACTTGACGACCTTCCACATCATTGCAATGTTTGTGGCCTAAGGCTTAAACATCAAGAACAGTTTAATAGACACTTGGAGTGGCATGCTACTAGAGAAAGGGAACGAAATGGTCTAATTAAAGCGTCAAGAGGATGGTATGCAAAATCTAGCTACTGGATTGGTGCTGGTGAGGCTGAAATCCCATCTGAGTCGGAGCATACTGATTCTGTAGACATATATGCCAAGACAAGAGACAATAGTGAATTGGAGGAGATGGTTCCAGCAGATGAAAACCAATGCTTGTGTGTATTGTGTGGTGAGATTTTTGAAGATGTTTTCTGTCAAGAAAGGAATGAGTGGATGTTCAAAGGGGCTGCTTACATGACAATCTCAGATAGCAATGGCGAGATGGGTAGTGGCCCGATCATTCATGCAAAATGCTTATCAAGGAGCTCCGTATCAGTTGTTGCTAAAATGGAACAAGATTAATGCTTCGGAGCATCTAAGTGTCAACGTCGTTATCTGAAGCCTACGAAGGGTACCCAGGTTTATTTTGGCTTTACTGAACCTTTATGACCCTTTCTTGCTAAATTTGTTTCCTTTAACTGGTTCCTGGAGCCATCAAGCAAATTTTGTTCCTTTTCTTTGCTTTCTTCTATCTAATCAGGTTAAAAAGAATTTCCATAGTGTTCAAAATATATAAATGGCAGATAGTTTTGCAGCTCAATTCGCTCATTGTTGTCATTATGTTTCTTTATTATTTTGTTCAAGCAGTTTTGCACTTTTAGCTGCATCTGATGCTCCCAATACCGAGGCAAAGCACTTATGGCCATGTTTATTAATCTCGACGTATGTGAGATGGCGTTTTGCGTATCATTTAGATTAATATTTCTGTTAAGATTTTTATTGTCAGATAGCCAATTCGGCAAATTCCCCCACCCCCCACCCAAAAAAAAAAGCTATACATTTTTTAGTACTGTTATTATTCCTTTAAATTTTCCATACTGTCATGCTCTTATGTATTAAAAGAACATTTCATATT 3995 0.4273 MENLRRSFDRSREAGVKKPRLTDEPERVPNSSIRQFPQRQVGSGVNTFASAARFRTNDRDSESSDSGRGGYHPQQPLHQELVTQYKTALAELTFNSKPIITNLTIIAGENLYAAKAIAATVCANIIEVASEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRHVDPSVHQSMRHLFGTWKGVFPPPTLQMIEKELGFSPAVNGSSSSSTLKSNLPSQRPPHSIHVNPKYLERQQLQQSTRTKGIANDMTGAISNSTENAERPDRAVGGGRPWTDPSVNIHSIQRSHRDAFNDSVPEKSTPASYVGNEYNSDLSKNLGLGVGRTGGRVSEVGYDKTWYKAAGGGVAETIAGQRNGFNVKHGLLNHEGPKSMNLDANHQTIQSLTSLRSNVMSSSWKNSEEEEFMWDGMNSGLTDRGASNIPSSLNKNHWTADNENLEGEDNLPIPRHFMSKVDQETSTEKKQLPAFGHRSSVSWQLQEQHSIDELDRRPGHSEGYASNLGDLPTNPLVRIGNRPFLPNATTGSAGMAAQPQFSMRAGSPSGQSPLRQQSPSPPVPMRHPTNQLRNIAEEDRTQSLKTSQFSGSLQGRHFRDPSPAPPPKVQVSNLRRSQQKDPRIPLSSVTSFPQRHHSALLQQQELGSSDSGVSDKTEKRPQSEVTLAAETSKQSTTSSLLAAVMKSGIFSNNSIISSIPNLSFLDTKNLPLQSGVQPSRPAGSSTSLISSGLGVASPSSLDPPNDDSSTLPNISQGKVGQPPRPPPQRPYSSITSSASAQTSSDTNSTSNPISNLLSSLVAKGLISAKTGSTSEVLAEMQTRLEEPSQSVTTSTSLPVASFPGPAAIPESSTGDDVNHDAKSSAAISQSTATETRNLIGFEFKPDLIRELHPDVIRDLLDDLPHHCNVCGLRLKHQEQFNRHLEWHATRERERNGLIKASRGWYAKSSYWIGAGEAEIPSESEHTDSVDIYAKTRDNSELEEMVPADENQCLCVLCGEIFEDVFCQERNEWMFKGAAYMTISDSNGEMGSGPIIHAKCLSRSSVSVVAKMEQD 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00906 1050 MobiDBLite consensus disorder prediction 259 283 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 607 647 - -
Bach8g00906 1050 FunFam polyadenylation and cleavage factor homolog 4 74 202 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 767 787 - -
Bach8g00906 1050 SUPERFAMILY ENTH/VHS domain 79 204 IPR008942 -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 437 463 - -
Bach8g00906 1050 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 57 1042 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Bach8g00906 1050 MobiDBLite consensus disorder prediction 28 54 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 464 484 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 577 591 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 817 865 - -
Bach8g00906 1050 Pfam CID domain 86 195 IPR006569 -
Bach8g00906 1050 ProSiteProfiles CID domain profile. 77 205 IPR006569 -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 1 27 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 817 836 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 521 550 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 711 753 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 208 226 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 711 787 - -
Bach8g00906 1050 CDD CID_Pcf11 82 194 IPR047415 -
Bach8g00906 1050 Gene3D - 72 202 IPR008942 -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 419 673 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 1 75 - -
Bach8g00906 1050 ProSitePatterns Zinc finger C2H2 type domain signature. 903 923 IPR013087 -
Bach8g00906 1050 SMART 558neu5 80 202 IPR006569 -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 208 230 - -
Bach8g00906 1050 MobiDBLite consensus disorder prediction 419 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00906 Bach-Chr8 5991879 5999365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00906 53 417 C2H2 Transcription Factor Family AT4G04885 38.420 1.01e-56 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g00906 CID 1.8e-13 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00906 K14400 - gmx:100811629 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00906 8 5991879 5999365 Bach1g02416 1 35702976 35709432 BWGD
Bach8g00906 8 5991879 5999365 Bach8g00906 8 5991879 5999365 ECH