Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00901 CTTTATTCCATCTCTCAAAATTCTCTGGTCACTTGTACTCTTCTTCAAACTCTCCTGCGTCCCTCAACAGTCTCACGCGGCAAACAACTACAAGAATGGAATTTTGGGGTGTTGAGGTCAAAAGTGGGGAAGCTCTCAAAGTTTCACCAGGAGACAATAAGATCTTGCATCTCTCACAGGCTTCTCTGGGTGAGGTCAAGAAGGATAAAGGAAGTGAACCCGTCTCCTTGTTTGTGAAGTTTGGTGATCAGAAGCTTGGACTTGGAATGCTTTCTTCTGACAAATTTCCTCAGATATCTTTCGATTTGGTGTTTGAAAAGGAATTTGAGTTATCTCATAATTGTAAAAATGGGAGTGTCTACTTTGTTGGATATAAAGCCAGAGGAAGGGAGGATGAATTTTCTGATGATTCTGATTTTGATGATGATGTCATTCCATTTGGTGCCCCAATCAATGGTTCCCAGGTTAAGCAAGAAGTCAAGCCAGATGCAAATGCAGGTGTGCAAAAGGTGAATAATCTGAAGGCAGGGAATCCAAAAAAGGATGACAAGGCCAATCAAAAGGAGGATGATAACAGTGACGATGAGGAAGATTCCTCTGAAGATGAATCAGATGAGTCTGATGAGGATTCTGATGAAGATGAGCCTATGATGATGAAAGGAGCAATAGGAAGTGAAGATGAAGATGATAGTAATAGTGATGACGACGACGACGATGATGATGAAAGTGAGGATGAAGAGACACCCAAGAAGGCTGAAGCAAGCAAGAAGAGGCCTATGGAATCTGCTAAAAAGACACCTCTGCCAGAGAAGAAGGCAAAATTGATTACTCCACAAAAGACAGATGTCAAGAGAGGTATCCCTCATGTTGCAACTCCTCATCCTTCTAAGGGAGCTGGGAAGGCAGCTGCGTCTAAGAAGGACCAGGCAAAGCAGCAGACTCCTAAGTCTGGTGGAGATTACAGTTGCACACCTTGCAACAGGTCATTCAAGACAGACGATGCACTACAATCTCATAATAGGGCCAAGCACAGTGCTAAGTAAGCAAGCAAGGTATATTTTGCTTGAACACTAAGCATTTTGATGTTTCCTTGAAGTTTGGATGGCAGTGAACAGAGTTGTAGTTTAGTTGATGTAAGAGAGGTAGTCCAGAGATTATGGTTTTAACAATTTTGTTGCTTTATAAAATCCGAGAGCGAAGCACTAATCAATTCTAATTTGTTGTGTATGGTTTTTGGCTATTTTAAATCACTTTCTTCGGTCTTATGGTAATTGTGAT 1278 0.4147 MEFWGVEVKSGEALKVSPGDNKILHLSQASLGEVKKDKGSEPVSLFVKFGDQKLGLGMLSSDKFPQISFDLVFEKEFELSHNCKNGSVYFVGYKARGREDEFSDDSDFDDDVIPFGAPINGSQVKQEVKPDANAGVQKVNNLKAGNPKKDDKANQKEDDNSDDEEDSSEDESDESDEDSDEDEPMMMKGAIGSEDEDDSNSDDDDDDDDESEDEETPKKAEASKKRPMESAKKTPLPEKKAKLITPQKTDVKRGIPHVATPHPSKGAGKAAASKKDQAKQQTPKSGGDYSCTPCNRSFKTDDALQSHNRAKHSAK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00901 315 ProSitePatterns Zinc finger C2H2 type domain signature. 291 312 IPR013087 -
Bach8g00901 315 MobiDBLite consensus disorder prediction 216 247 - -
Bach8g00901 315 MobiDBLite consensus disorder prediction 100 315 - -
Bach8g00901 315 MobiDBLite consensus disorder prediction 196 215 - -
Bach8g00901 315 FunFam Histone deacetylase HDT1 1 99 - -
Bach8g00901 315 Pfam Nucleoplasmin-like domain 3 93 IPR041232 -
Bach8g00901 315 Gene3D Nucleoplasmin core domain 1 99 - -
Bach8g00901 315 MobiDBLite consensus disorder prediction 275 301 - -
Bach8g00901 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 289 315 IPR013087 -
Bach8g00901 315 MobiDBLite consensus disorder prediction 157 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00901 Bach-Chr8 5946249 5949906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00901 1 314 C2H2 Transcription Factor Family AT5G03740 40.379 3.79e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g00901 NPL 6.3e-09 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00901 - - qsa:O6P43_005881 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00901 8 5946249 5949906 Bach8g00901 8 5946249 5949906 ECH