Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00892 ATGATGAATAAGCGTTATTCCACAAACGGGGTCTTAGGTTTGGCCTTCTTCTCCCTCACATTCACACTGTCTCTCTGTCTTCACCATCACCAGAATGACACCTACGCCCTCACCCAATTTCAGCTTCAAACGGACGCTCATGGCTACCTCACCTCTAACTGGACAGGCCCTGATGCCTGCACTGCCACCTGGCGCGGCGTTCAATGCTCCTCCAATGGCAGAGTCACCGCCCTCTCTCTCCCTTCCCTCAATCTCAGAGGTCCCATTGATTCTCTCTCATCACTCACCCACCTTCGCCTCCTTGACCTCCACGATAACCGTTTAAACGGTACCATTACGCCCCTCTACAACTGCACTAACCTCAATCTCCTTTATCTCTCCAACAATGACTTCTCCGGCGAGATACCACAGGAGATATCTTCCCTCAAGTTTCTACTCAGGCTTGACCTCTCCGACAACAACATTGGTGGCCCAATTCCCAAGGAATTGTCCCAATTGAATCAGCTTCTCACGCTTCGGTTACAGAACAATGTACTCTCTGGCCAAATTCCAGATCTTTCTGTTTCTCTGGTGAACCTCAAAGAACTGAATATGACCAACAACGAGTTCAACGGACGCGTGTCCGATGTAATGTTGAAGAAATTCGGTGATATAAGCTTTTCGGGGAATGAAGGTCTATGTGGATCGAACCCATTTCCGGTTTGTTCCTTTACTGAGAATCCACCTTCCACAGCACCAAACGAGATAGTTCCTTCTAACCCGAGCTCGTTGCCACAAACAAGCATAATTGCTCAGCCCAAAGCCCAATCGCGAAAAGGGCTAAGTCCCGGGGCTATAGTAGCCATTGTGGTAGCTAATTGTGTGGCATTGTTAGTGGTAACCTCTTTCATTGTCGCTCACTGTTGTGCCAGAGGACGAAGCTCCAATTCTATGGTGGGTAGTGAAAGCGGAAAGAGGAAAATCAGTAGTTATGGAAGTGAGAAGAAGGTGTTTGCCAATGGGGGTGGAGATAGTGATGGTACTACTGAGACGGACCGAAGCAAGCTTGTATTTTTCGATAGGAGGAGTCAATTTGAGCTCGAAGATTTGCTGCGAGCATCGGCGGAGATGCTGGGGAAAGGTAGCTTGGGAACAGTTTATAGGGCAGTGCTTGATGATGGATGCACGGTGGCTGTGAAGAGGCTCAAGGACGCAAACCCATGCGTCAGAATGGAGTTTGAGCAGTACATGGATGTGATTGGAAAACTGAAGCACCCAAATATTGTCAGACTCAGAGCCTTTTACTATGCCAAAGAAGAAAAGCTTCTCGTTTATGATTACCTTCCCAATGGAAACTTGCATTCTCTTCTCCATGGGAACCGAGGTCCAGGGAGAATTCCATTGGATTGGACCACAAGAATTAGCTTGGTGTTAGGGGCAGCCAGAGGACTCGCTCGGATTCATGCAGAGTACAGTGCAGCAAAGATACCTCATGGGAACATCAAATCTTCCAACGTGCTTCTTGACAAGAATGGTGTTGCTTGCATCTCTGATTTCGGGTTGTCTCTGTTATTGAACCCTGTCCACGCCATTGCAAGAATGGGAGGGTACAGAGCTCCTGAACAAGCAGAAGTCAAGAGACTCTCTCAGCAAGCAGATGTTTATAGCTTTGGGGTCCTATTGTTGGAAGTTCTGACCGGGAGAGTTCCCTCACAGTACCCTTCTCCAACTCGTCCTCGGGTTGAACAAGAGGAATCACAAGCTGTGGATCTTCCCAAATGGGTGCGTTCTGTTGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTCTTGCGGTACAAGAACATTGAAGAAGAGCTGGTTTCAATGCTGCATGTGGGGTTGGCTTGTGTGGTGCCTCAGCCAGAGAAGAGGCCAACCATGGCAGAAGTAACCAAGATGATAGAGGATATCAGGGTAGAGCAATCTCCTCTTGGAGAGGATTATGATGAGTCACGCAACTCGCTTTCTCCTTCACTTGCCACCACTGAAGATGGGTTACCATGA 2031 0.4825 MMNKRYSTNGVLGLAFFSLTFTLSLCLHHHQNDTYALTQFQLQTDAHGYLTSNWTGPDACTATWRGVQCSSNGRVTALSLPSLNLRGPIDSLSSLTHLRLLDLHDNRLNGTITPLYNCTNLNLLYLSNNDFSGEIPQEISSLKFLLRLDLSDNNIGGPIPKELSQLNQLLTLRLQNNVLSGQIPDLSVSLVNLKELNMTNNEFNGRVSDVMLKKFGDISFSGNEGLCGSNPFPVCSFTENPPSTAPNEIVPSNPSSLPQTSIIAQPKAQSRKGLSPGAIVAIVVANCVALLVVTSFIVAHCCARGRSSNSMVGSESGKRKISSYGSEKKVFANGGGDSDGTTETDRSKLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCVRMEFEQYMDVIGKLKHPNIVRLRAFYYAKEEKLLVYDYLPNGNLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVLLDKNGVACISDFGLSLLLNPVHAIARMGGYRAPEQAEVKRLSQQADVYSFGVLLLEVLTGRVPSQYPSPTRPRVEQEESQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVPQPEKRPTMAEVTKMIEDIRVEQSPLGEDYDESRNSLSPSLATTEDGLP 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00892 676 CDD STKc_IRAK 371 646 - -
Bach8g00892 676 SUPERFAMILY L domain-like 31 213 - -
Bach8g00892 676 Gene3D Transferase(Phosphotransferase) domain 1 441 664 - -
Bach8g00892 676 MobiDBLite consensus disorder prediction 650 676 - -
Bach8g00892 676 SUPERFAMILY Protein kinase-like (PK-like) 369 643 IPR011009 -
Bach8g00892 676 ProSiteProfiles Protein kinase domain profile. 365 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00892 676 Pfam Protein kinase domain 369 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00892 676 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 441 655 - -
Bach8g00892 676 FunFam pollen receptor-like kinase 1 336 440 - -
Bach8g00892 676 FunFam Nuclear pore complex protein NUP107 30 185 - -
Bach8g00892 676 Gene3D Ribonuclease Inhibitor 25 110 IPR032675 -
Bach8g00892 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 648 IPR046959 -
Bach8g00892 676 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Bach8g00892 676 Gene3D Phosphorylase Kinase; domain 1 337 440 - -
Bach8g00892 676 Gene3D Ribonuclease Inhibitor 113 236 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00892 Bach-Chr8 5887373 5889504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00892 31 672 Receptor kinase-like Gene Family AT2G36570 69.592 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach8g00892 Pkinase 8.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00892 - - qsa:O6P43_009504 1040.02