Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00887 ATGGATTGGAATGGGAGCATTAGACCCTTCGTTCCTCGAGCAGATTCTTCCTTAAGCTTGCTCTACAACTATAACTACAGCCCATATCCAGGAATGGAAGTGAAACATTCAGCATTAGCTGAGACACCACAAGGGTTCCTCCAGTCTGTAGACAAAATGAGCTACGGTAACCTGGAGAAGAAGAAGCGACTGACAGTCGATCAACTTGACTCGCTGGAGAGGAGTTTCCAGGAGGAGATAAAGTTGGACCCAGATAGGAAGATGAAACTTTCCAGGGAGCTGGGGCTCCAGCCTCGCCAAATTGCTGTTTGGTTCCAAAATAGGCGTGCAAGGTGGAAGGCTAAGCATCTTGAACACTCGTACGATGCACTCAGACAGGAATTTGATGTCATCTCCAAGGAAAAACAGAAGCTTCAAGAAGAGGTAACGAAGTTGAGGGCTGTGCTGAGACAGCAAGCTTGTAGAGCGCAGGCCTCTGCAGGTTATACAGAAATATCTGGAGAAGAAACAGTAGAAAGCACATCAGAGGCCATGCCCAGCTCTAACAAGCAGATTGCAGAGGGCAACTATTCTTTCACCTTGGATGATTACAACACTGTTTCACTGCCGTACTGGGCTGTTGTGCCTCATTATCCCTAA 639 0.4726 MDWNGSIRPFVPRADSSLSLLYNYNYSPYPGMEVKHSALAETPQGFLQSVDKMSYGNLEKKKRLTVDQLDSLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKHLEHSYDALRQEFDVISKEKQKLQEEVTKLRAVLRQQACRAQASAGYTEISGEETVESTSEAMPSSNKQIAEGNYSFTLDDYNTVSLPYWAVVPHYP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00887 212 CDD homeodomain 60 116 IPR001356 GO:0003677
Bach8g00887 212 FunFam Putative homeobox-leucine zipper protein ATHB-51 57 120 - -
Bach8g00887 212 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 51 174 IPR045224 GO:0003700
Bach8g00887 212 Pfam Homeobox associated leucine zipper 117 149 IPR003106 GO:0006355|GO:0043565
Bach8g00887 212 SMART HOX_1 57 119 IPR001356 GO:0003677
Bach8g00887 212 SUPERFAMILY Homeodomain-like 60 125 IPR009057 -
Bach8g00887 212 PRINTS Lambda-repressor HTH signature 86 95 IPR000047 GO:0003677
Bach8g00887 212 PRINTS Lambda-repressor HTH signature 95 111 IPR000047 GO:0003677
Bach8g00887 212 Pfam Homeodomain 60 113 IPR001356 GO:0003677
Bach8g00887 212 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Bach8g00887 212 Gene3D - 59 120 - -
Bach8g00887 212 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Bach8g00887 212 Coils Coil 107 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00887 Bach-Chr8 5856200 5857666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00887 16 145 Homeobox Transcription Factor Family AT5G03790 56.522 3.96e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach8g00887 Homeodomain 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00887 - - vvi:100251028 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00887 8 5856200 5857666 Bach1g02435 1 35855066 35856471 BWGD