Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00886 ATGGTTCTGAAGACGGAGCTTTGTCGTTTCAGTGGGGCCAAGATCTACCCAGGCAAAGGCATCAGATTTGTTCGTGGAGATTCTCAGGTCTTCCTGTTTGCAAACTCAAAATGCAAAAGGTATTTCCACAACCGGTTGAAGCCATCCAAGCTCACCTGGACTGCCATGTATCGGAAGCAACACAAGAAGGACATTGCGCAAGAAGCTGTGAGGAAGAGGCGTCGTACTACAAAGAAACCTTACTCTAGGTCTATTGTTGGCGCTACTTTGGAAGTCATCCAGAAGAAAAGAACTGAGAAACCAGAGGTTCGGGATGCTGCTAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCCAAGAAGGCAGAAGTACTTGCCAAGGCACAAAAAACACAAGGCAAAGGCGGTGTTGCCAAGGGTGCTGGACCTAAGGGTCATAAACTTGGTGGTGGAGGCGGGAAGCGCTGAATCTCTAGTTTCTTTCCTTTTTCGATACCGTTTAAAATGATGGATAGAGTTTCCAAATTTTTGTATGCATCTATTTTATTTGCTTGAACAACCTTTTACTGTTTCTTTGACATACTTGTTTGAGACTAGAGTTCTTAATTATTAATGGATTTCTCGAGCTGCACTAGAT 664 0.4367 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVRKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVLAKAQKTQGKGGVAKGAGPKGHKLGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00886 164 Gene3D - 69 141 - -
Bach8g00886 164 MobiDBLite consensus disorder prediction 121 164 - -
Bach8g00886 164 FunFam 60S ribosomal protein L24 3 64 - -
Bach8g00886 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Bach8g00886 164 PANTHER 60S RIBOSOMAL PROTEIN L24 4 141 IPR000988 -
Bach8g00886 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Bach8g00886 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Bach8g00886 164 SMART 4TRASH 8 46 IPR011017 -
Bach8g00886 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Bach8g00886 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Bach8g00886 164 MobiDBLite consensus disorder prediction 121 136 - -
Bach8g00886 164 Coils Coil 112 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00886 Bach-Chr8 5852105 5854003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00886 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.803 9.70e-86 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00886 K02896 - rcu:8274878 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00886 8 5852105 5854003 Bach1g02436 1 35858187 35860533 BWGD
Bach8g00886 8 5852105 5854003 Bach8g00886 8 5852105 5854003 ECH