Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00885 ATGGGAGACAAGCACGAAGAGGATCGAACTGAGAGCAGTGATTACTCGTCCGATGACGAAGGAACCGAGGATTATCGACGGGGAGGCTACCACGCTGTGCGAATCGGTGACACCTTCAAGAATGGTCGCTATGTCGTTCAGAGTAAGCTAGGTTGGGGGCATTTCTCTACTGTTTGGCTCGCTTGGGATATACAACACTCTAGATATGTTGCTCTGAAAGTTCAAAAGAGCGCCCAGCATTACACTGAGGCAGCAATGGACGAGATAACCATTTTGCAGCAGATTGCAGAGGGAGATCCAGATGATAAAAAATGTGTGGTAAAGCTATTGGATCATTTCAAGCACTCGGGTCCAAATGGACAGCATGTTTGCATGGTATTTGAGTACCTGGGGGATAATCTTTTAACTCTTATCAAGTACAGTGATTATCGTGGAATGCCTATCCATCTGGTTAAAGAGATATGTTTTCATATTTTGGTTGGATTGGATTACTTACATCAGCAACTATCTATCATACATACGGACTTAAAACCTGAGAACATCCTCGTATTATCAGTGATAGATCCATCTAAGGATCCTAGAAAGTCTGGTGCTCCTCTAATTCTTCCTAACAGTAAAGACAAGACTGTACTGGAGTCAGGAGTTGTAAAAGACACAAAAACATCAAATGGCGATTCGTTTAGGAATCATAAGAAAAATATTAGAAGGAAAGCTAAGAAAGCAGCTCAAGGATGCGTGGAGAAAGAAGCTTCTGAGGAAGTTGAGAGGGATCCAGAAACCTCTGGTACTGTAGACTTATCTCCTAATGTAATGTCAAAAGCTGGCTCGGTAAGAGAACAAGCTTCAAGTTCTGCTGGGGCTAATAGATTGTCAGGTGCTGATGAAACAAAGGGAGTAAAGAAAAGAGGAAACCGCTCATTGAGGCAGAAGCTACTGGCATCAGTTGATCTCAAGTGCAAAATAGTTGACTTTGGTAATGCTTGCTGGACGTATAAGCAGTTTACAAATGATATCCAGACTCGACAATATCGATGTCCAGAGGTGATCCTTGGATCTAAGTATTCTTCCTCCGCAGATCTTTGGTCCTTCGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTACTATTTGATCCTCACAGTGGTGACAACTTTGACAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTGGGAATGATGCCACGTAAGATTGCATTAGGGGGCCGCTATTCCCGTGATTTATTTAATAGATATGGTGATTTGAGGCACATTCGGCGGTTGCGCTTTTGGCCCTTGAACAAAGTCCTGATGGAGAAATATGAATTCAATGAAGGAGATGCAAATGATATGGCTAACTTCTTGGTTCCTATCCTTGACTTTGTCCCTGAGAAACGGCCTACAGCTACGCAGTGCCTTCTTCATCCATGGATCAATGCAGGTCCACGCCTTTTGGAGCCATCTATACCTTCTAATCACAACCCATCTGTGGAAAGTGGTGTTTCTGATCAGAAGAAAAGAGATAAGGATGAGAGGGAGGCCATGCAGGTTGGAATGGGAAATATCGCCATCAATTCAGATTCTAAACCACTGCTGAAATCTGTGTCTAAGAAATCCTTCCAAAGCAGCCAGAAGTAGTTAGTTCATCTACGTGGAACTCTTGCTTTGGCTGTTTTATGTTGGGGTTGTGCCCTTTCCATTCAATGTGTTGGTCTTGCAGGGCACGTTGGTCTAGCATTGTGTATGAGCATGGAATGAGAAGCGTCTGTTGATGGCGTAGCTCAGTGGCTTAAACCAGTTGCTTGTTCTCTGAATAGTCTCACTTCGATAATTCTCATTATGATATTCAGTAGATAGGGTCAAATTGGCCTTTCTTTTATGAACTGCGTTCATACTTGATTTCCTACGTCCTACGTGTTGTGGATATTATTGATATAAATACATTCTATAGATATTTCAATTCCA 1968 0.4258 MGDKHEEDRTESSDYSSDDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQHSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGMPIHLVKEICFHILVGLDYLHQQLSIIHTDLKPENILVLSVIDPSKDPRKSGAPLILPNSKDKTVLESGVVKDTKTSNGDSFRNHKKNIRRKAKKAAQGCVEKEASEEVERDPETSGTVDLSPNVMSKAGSVREQASSSAGANRLSGADETKGVKKRGNRSLRQKLLASVDLKCKIVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSSSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDLFNRYGDLRHIRRLRFWPLNKVLMEKYEFNEGDANDMANFLVPILDFVPEKRPTATQCLLHPWINAGPRLLEPSIPSNHNPSVESGVSDQKKRDKDEREAMQVGMGNIAINSDSKPLLKSVSKKSFQSSQK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00885 546 MobiDBLite consensus disorder prediction 240 260 - -
Bach8g00885 546 FunFam Serine/threonine-protein kinase SRPK-like protein 309 479 - -
Bach8g00885 546 FunFam CMGC/SRPK protein kinase 30 129 - -
Bach8g00885 546 Gene3D Transferase(Phosphotransferase) domain 1 127 480 - -
Bach8g00885 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bach8g00885 546 MobiDBLite consensus disorder prediction 262 290 - -
Bach8g00885 546 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Bach8g00885 546 Pfam Protein kinase domain 312 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00885 546 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00885 546 ProSiteProfiles Protein kinase domain profile. 44 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00885 546 MobiDBLite consensus disorder prediction 501 516 - -
Bach8g00885 546 MobiDBLite consensus disorder prediction 1 24 - -
Bach8g00885 546 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Bach8g00885 546 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 509 - -
Bach8g00885 546 SMART serkin_6 44 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00885 546 CDD STKc_SRPK 33 479 - -
Bach8g00885 546 MobiDBLite consensus disorder prediction 486 546 - -
Bach8g00885 546 MobiDBLite consensus disorder prediction 220 303 - -
Bach8g00885 546 SUPERFAMILY Protein kinase-like (PK-like) 39 494 IPR011009 -
Bach8g00885 546 MobiDBLite consensus disorder prediction 522 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00885 Bach-Chr8 5844550 5849970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00885 10 545 EF-hand Containing Proteins AT5G22840 66.108 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bach8g00885 Pkinase 6.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00885 K08832 - qsa:O6P43_005863 920.613