Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00877 CTCCAATCTAGAATTGTTTTTGAACTCTTATTAATCTGATTCATCAAAATTACACTTGATAGAGCGTTCTCTCTACAAGCCGTTTCAGTCTACATTTCTGCTTGCTCCTCGCATTCTACGTTCAACTATGGCTGAATCAATCTCCAGTGACGCCTCCAACAGCATTCCACCGCCGGAGAGCAAGCCAGCGGCGCCGGAGCGTAAAAGTTGGGCCGATGAAGCAGAGGAGGACGTTCTTGAAGAAACTAATGGGCCTTCGAGTTCAGCATCAGTCTCGTCGCTTAACGTTGACGGATTAGCAATAGACGAGAACAAGAAGCAAGCTAAAGCTAAGTTTTTGGATGAACCGGATGACTCCAACGTCAAAGCGATTACTTCTGGTGATACACCGTATAATTCAGCAAGTGCGTTTGAAGATTTAAATCTCTCTCCAGAGCTGCTAAAGGGATTGTATGTTGAGATGAAGTTTCAGAAGCCTAGCAAAATTCAAGCTATCAGTTTGCCAATGATATTGAGCCCACCTTTTAAGGATCTGATTGCCCAGGCACATAACGGTTCTGGCAAGACAACATGTTTCGTGCTTGGGATGTTAAGTCGCGTTGATCCTAAGCAACAAGCTCCTCAAGCTCTTTGCATTTGTCCAACAAGAGAATTGGCTCTTCAGAATACTGAAGTGCTTCGAAAGATGGGAAAATACACAGGGATTAGTTCAGAATGTGCCATACCAACAGATAGCCGAGATTCTATTCCAATATCAAAACGGCCTCCAATCATGGCACAAGTAGTGATTGGGACCCCTGGCACGATAAAGAAGTGGTTGACATTTAAGAAACTGAGTGTAAGCAGATTAAAAATTCTCGTTTTTGATGAGGCCGATCAAATGCTTGCTGAGGATGGTTTTAGAGATGATTCCTTGAGGATAATGAAAGAAATAGAAAGGGTCAATCCTCAGTGTCAGGTTCTTCTGTTTTCTGCTACATTCAATGACACTGTTAAGAATTTTGTTTCAAGGACAGTTAAACCAAACCACAATCAACTTTTTGTGAAGAAAGAAGAGCTATCTTTAGCGGCGGTGAAGCAATACAAGGTGAACTGTATTGATGAACTCTCTAAAATTGAAGTGGTCAAAGATTATATATTTGAAATTGGAGAGAATGTAGGGCAAACTATTATATTTGTCCGTACAAGAAATAGTGCAAAGATGTTACATAAATCACTTGTTGATATGGGCTATGGGGTTACTTCCATACAAGGAGCTCTTGAACATGACGAGAGAGACAAGATAGTCAAGGAGTTCAGGGATGGTTTGACTCAAGTTCTTATCTCAACTGATGTTCTTGCTCGAGGCTTTGATCAACAACAGGTTAATTTGGTTATCAATTATGATCTTCCAGTCAAACATACTGCTGAGTATACCCGTGAACCTGAGCCAGATTACGAGGTGTATTTGCACAGGGTTGGTAGGGCTGGACGCTTTGGTCGCAAGGGGGCTGTATTTAACATGACATGCGGCGATTGGGATGAAAAACTCATGCAGAAGATAGAGAAGCATTTTGGCACCCAAGTAATTGAGGTCCCAGAAAAAAGTGTTGAAGCATATAAAACCGCACTAAAGGAGGCTGGTTTACTTCAATGATGTGAAGCTATGAAGTAGCTGAAGGATTTGAGAATTGTGTTTGACTCTGGTAATGCCCAAGGATGGTCATATGCATGGACACACTCTGACCACAGTACAAGTATAGTGAAGACTAGTTTTTAAGTCGGTGATTTTCTCTTTTTATTTTTATATGTAGGAAGAAGAGTTTCTTGTAATTTATCGGATATTAGGGTGATCATGATGGGAGTATTCTTCATGAGTGGATTTGTATTTTTGACTCTGAATAATGCCGAGCATTGTGGATTCCTTCTACTCTTTACTATTAA 1923 0.4093 MAESISSDASNSIPPPESKPAAPERKSWADEAEEDVLEETNGPSSSASVSSLNVDGLAIDENKKQAKAKFLDEPDDSNVKAITSGDTPYNSASAFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILSPPFKDLIAQAHNGSGKTTCFVLGMLSRVDPKQQAPQALCICPTRELALQNTEVLRKMGKYTGISSECAIPTDSRDSIPISKRPPIMAQVVIGTPGTIKKWLTFKKLSVSRLKILVFDEADQMLAEDGFRDDSLRIMKEIERVNPQCQVLLFSATFNDTVKNFVSRTVKPNHNQLFVKKEELSLAAVKQYKVNCIDELSKIEVVKDYIFEIGENVGQTIIFVRTRNSAKMLHKSLVDMGYGVTSIQGALEHDERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKHTAEYTREPEPDYEVYLHRVGRAGRFGRKGAVFNMTCGDWDEKLMQKIEKHFGTQVIEVPEKSVEAYKTALKEAGLLQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00877 502 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 93 122 IPR014014 GO:0003724
Bach8g00877 502 CDD DEADc_DDX19_DDX25 100 304 - -
Bach8g00877 502 CDD SF2_C_DEAD 316 459 - -
Bach8g00877 502 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 127 303 IPR014001 -
Bach8g00877 502 Gene3D - 72 310 IPR027417 -
Bach8g00877 502 MobiDBLite consensus disorder prediction 1 51 - -
Bach8g00877 502 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 65 472 - -
Bach8g00877 502 SMART helicmild6 358 451 IPR001650 -
Bach8g00877 502 SMART ultradead3 113 319 IPR014001 -
Bach8g00877 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 467 IPR027417 -
Bach8g00877 502 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 332 491 IPR001650 -
Bach8g00877 502 Pfam DEAD/DEAH box helicase 119 291 IPR011545 GO:0003676|GO:0005524
Bach8g00877 502 Gene3D - 311 491 IPR027417 -
Bach8g00877 502 Pfam Helicase conserved C-terminal domain 330 451 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00877 Bach-Chr8 5775994 5779886 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00877 94 484 Eukaryotic Initiation Factors Gene Family AT1G72730 36.341 6.60e-70 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00877 K18655 - qsa:O6P43_010208 755.362