Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00875 ATGGCTGAATCAGTCTCCAGTGACGCCTCCAACAGCATTCCACCGCCGGAGAGCAAGCCAGCGGCGCTGGAGCATAAAAGTTGGGCCGATGAAGCAGAGGAGGACGTTCTTGAAGAAACTAATGGGCCTTCGAGTTCAGCATCAGTCTCGTCGCTTAACGTTGACGGATTAGCAATAGACGAGAACAAGAAAGAAGCTAAAGCTAAGTTTTTGGATGAACCGGATGACTCCAACGTCAAAGCGATTACATTTGGTAATACACCGTATAATTCAGCAAGTACGTTTGAAGATTTAAATCTCTCTCCAGAGCTGCTAAAGGGATTGTATGTTGAGATGAAGTTTCAGAAGCCTAGCAAAATTCAAGCTATCAGTTTGCCAATGATATTGAGCCCACCTTTTAAGGATCTGATTGCCCAGGCACATAACGGTTCTGGCAAGACAACTTGTTTCATGCTTGGGATGTTAAGTCGCGTTGATCCTAAGCAACAAGCTCCTCAAGCTCTTTGCATTTGTCCAACAAGAGAATTGGCTCTTCAGAATACTGAAGTCCTTCGAAAGATGGGAAAATACACAGGGATTACTTCAGAATGTGCCATACCAGCAAATAGCCGAGATTCTATTCGAATATCAAAACAGCCTCCAATCATGACACAAGTAGTGATTGGGACCCCTGGCACGATAAAGAAGTGGTTGACATTTAAGAAACTGAGTGTAAGCACATTAAAAATTCTCGTTTTTGATGAGGCCGATCAAATGCTTGCTGAGGATGGTTTTGGAGATGATTCCTTGAGGATAATGAAAGCAATAGAAAGGGTCAATTCTCAGTGTCAGGTTCTTCTGTTTTCTGCTACATTCAATGACACTGTTAAGAATTTTGTTTCAAGGACAGTAAAACCAAACCACAATCAACTTTTTGTGAAGAAAGAAGAGCTATCTTTAGCGGCGGTGAAGCAATACAAGGTGAACTGTATTGATGAACTCTCTAAAATTGAAGAGGTCAAAGATTATATAGTTGAAATTGGAGAGAATGTAGGGCAAACTATTATATTTGTCCATGCAAGAAATAGTGCAAAGATGTTACATAAAGCACTTGTTGATATGGGCTATGGGGTTACTTCCATACAAGGAGCTCTTGAACATGAAGAGAGAGACAAGATAGTCAAGGAGTTCAGTGATGGTTTGACTCAAGTTCTTATCTCAACTGATGTTCTTGCTCGAGGTTTTGATCAACAACAGGTTAATTTGGTTATCAATTATGATCTTCCAGTCAAACATACTGCTGAGTATACCCGTGAACCTGAGCCAGATTACGAGGTGTATTTGCAGAGGGTTGGTAGGGCTGGATGGTTTGGTCGCAAGAGGGCTGTATTTAACCTGATATGTGGCGATAGGGATGAAAAGCTCATGCAGAAGATAGAGAAGCATTTTGGCACCCAAGTAATTGAGAAAGAAGAGCTATCTTTAGCGGCGGTGAAGCAATACAAGGTGAACTGTATTGATGAACTCTCTAAAATTGAAGTGGTCAAAGATTATATATTTGAAATTGGAGAGAATATAGGGCAAACTATTATATTTGTCCGAACAAGAAATAGTGCAAAGATGTTACATAAAGCACTTGTTGATATGGGCTATGGGGTTACTTCCATACACGGAGCTCTTGAACATGAAGAGAGAGACAAGATAGTCAAGGAGTTCAGGGATGGTTTGACTCAAGTTCTTATCTCAACTGATGTTCTTGGTCGAGGCTTTGATCAACAACAGGTTAATTTGGTTATCAATTATGATCTTCCAGTCAAACATACTGCTGAGTATACCCGTGAACCTGAGCCAGATTACGAGGTGTATTTGCACAGGGTTGGTAGGGCTGGACGCATTGGTCGCAAGGGGGCTGTATTTAACCTGATATGCGGCAATAGGGATGAAAAGCTCATGCAGAAGATAGAGAAGCATTTTGGTACACAAGTAATTGAGGTTCCAGAAAAAAGTGTTGAAGCATATAAAACCGCACTAAAGGAGGCTGGTTTACTCAATGATGTGAGGCTATGA 2046 0.4125 MAESVSSDASNSIPPPESKPAALEHKSWADEAEEDVLEETNGPSSSASVSSLNVDGLAIDENKKEAKAKFLDEPDDSNVKAITFGNTPYNSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILSPPFKDLIAQAHNGSGKTTCFMLGMLSRVDPKQQAPQALCICPTRELALQNTEVLRKMGKYTGITSECAIPANSRDSIRISKQPPIMTQVVIGTPGTIKKWLTFKKLSVSTLKILVFDEADQMLAEDGFGDDSLRIMKAIERVNSQCQVLLFSATFNDTVKNFVSRTVKPNHNQLFVKKEELSLAAVKQYKVNCIDELSKIEEVKDYIVEIGENVGQTIIFVHARNSAKMLHKALVDMGYGVTSIQGALEHEERDKIVKEFSDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKHTAEYTREPEPDYEVYLQRVGRAGWFGRKRAVFNLICGDRDEKLMQKIEKHFGTQVIEKEELSLAAVKQYKVNCIDELSKIEVVKDYIFEIGENIGQTIIFVRTRNSAKMLHKALVDMGYGVTSIHGALEHEERDKIVKEFRDGLTQVLISTDVLGRGFDQQQVNLVINYDLPVKHTAEYTREPEPDYEVYLHRVGRAGRIGRKGAVFNLICGNRDEKLMQKIEKHFGTQVIEVPEKSVEAYKTALKEAGLLNDVRL 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00875 681 Gene3D - 75 310 IPR027417 -
Bach8g00875 681 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 507 666 IPR001650 -
Bach8g00875 681 Gene3D - 311 485 IPR027417 -
Bach8g00875 681 CDD DEADc_DDX19_DDX25 100 304 - -
Bach8g00875 681 CDD SF2_C_DEAD 491 635 - -
Bach8g00875 681 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 93 122 IPR014014 GO:0003724
Bach8g00875 681 Gene3D - 486 674 IPR027417 -
Bach8g00875 681 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 67 472 - -
Bach8g00875 681 SMART ultradead3 113 319 IPR014001 -
Bach8g00875 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 469 IPR027417 -
Bach8g00875 681 MobiDBLite consensus disorder prediction 1 53 - -
Bach8g00875 681 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 332 492 IPR001650 -
Bach8g00875 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 658 IPR027417 -
Bach8g00875 681 MobiDBLite consensus disorder prediction 39 53 - -
Bach8g00875 681 CDD SF2_C_DEAD 316 460 - -
Bach8g00875 681 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 127 303 IPR014001 -
Bach8g00875 681 SMART helicmild6 358 451 IPR001650 -
Bach8g00875 681 SMART helicmild6 533 626 IPR001650 -
Bach8g00875 681 Pfam DEAD/DEAH box helicase 119 291 IPR011545 GO:0003676|GO:0005524
Bach8g00875 681 Pfam Helicase conserved C-terminal domain 331 448 IPR001650 -
Bach8g00875 681 Pfam Helicase conserved C-terminal domain 505 626 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00875 Bach-Chr8 5752267 5761175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00875 480 659 Eukaryotic Initiation Factors Gene Family AT1G72730 38.889 9.55e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00875 K18655 - qsa:O6P43_010208 711.449