Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00856 ATCGAGCGGAAGGTTGAGACAGGTGAGGAAGCAGGGATGGATCGAGAGTGGGGTTCAAAGCCCGGCAGCGGAGGCGCCGCGTCCGCCCAAAACGAAGCCATTGACCGTCGAGAGCGTCTACGTCGACTCGCCTTGGAGACTATAGATCTTGCTAAAGACCCCTATTTTATGCGCAACCACCTTGGCAGCTATGAATGCAAGCTTTGCCTTACTTTACATAATAATGAGGGAAATTACTTGGCACACACACAGGGCAAGCGCCATCAGACTAATTTGGCTAAGAGAGCAGCTCGCGAGGCCAAAGAGGCTCCGGCTCAACCTCAGCCCCACAAGCGCAAAGTCTCTCTTCGCAAGTCAGTCAAGATTGGTAGGCCTGGTTACCGAGTGACTAAACAATATGATCCAGAGACAAAACAGAGATCTCTTCTTTTCCAGATTGAATATCCTGAAATTGAAGACCTCACAAAGCCAAGGCACAGATTCATGTCTTCTTATGAGCAGAGAGTGCAACCCTTTGATAAAAGATACCAGTATCTTTTATTTGGCGCCGAACCATATGAGATCATTGCTTTTAAGGTTCCTAGCACAGAGATTGATAAGTCCACTCCAAAGTTTTTCTCACACTGGGATCCAGATTCAAAGATGTTCACGTTGCAGTTATATTTCAAATCCAAGCCACCAGAGGCAAACAAACCACAGCCTGCCTCTGTGGCCAATGGTACAGCCGCGCCTGGTGTCCCTCCAAGGCCTTTGCCTCCCCCACCCCAAGCTCCACCACCACCACCACCTCCACCACAAGGGTTACCTCCTGTTGGAAACCCTCCTAGAGCACCTCCCCCTCCAATAGCTGGATCATTGCCGCCACCACCACCTCCTATGGCAAATGGGCCTAGATCTGTCCCCCCACCCCCTATTGCCAGTAGCACAACAGCAAATTTTAGCATGGGCTCTAGGCCTCCATTACCACCTCCACAAGGTTTTCCCGCCCAACAAATGCAGGGCCACCCTGTTCGTCCACCTCCACCGCCACCTAGCATGTGATAGGGGATCAGCCCTCCTCCTTGTGTAGCAGTAAGCATACCGTTATTGGAAGTCCAAGTTCTTTAGTCGCAGTGGAATGTCCTTTTGTGTTTTAAGGAATGGCTAGTGGCTAGGAGAGCCGTGGTTCCAACAAGTTTATCGAATATCTCGATACTAAGCCATTTGGTAATTTTGCATTTGACTTTGGTGGGAAAATTTTATTACGGTCGGTTTTATTAATGAAAAAATGATAA 1274 0.4914 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSLRKSVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFGAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPASVANGTAAPGVPPRPLPPPPQAPPPPPPPPQGLPPVGNPPRAPPPPIAGSLPPPPPPMANGPRSVPPPPIASSTTANFSMGSRPPLPPPQGFPAQQMQGHPVRPPPPPPSM 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00856 334 Pfam Zinc-finger of C2H2 type 52 76 - -
Bach8g00856 334 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Bach8g00856 334 SUPERFAMILY beta-beta-alpha zinc fingers 48 83 IPR036236 -
Bach8g00856 334 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Bach8g00856 334 Gene3D Classic Zinc Finger 46 89 - -
Bach8g00856 334 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 332 - -
Bach8g00856 334 FunFam Splicing factor 3a subunit 2 94 218 - -
Bach8g00856 334 MobiDBLite consensus disorder prediction 305 334 - -
Bach8g00856 334 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Bach8g00856 334 MobiDBLite consensus disorder prediction 1 21 - -
Bach8g00856 334 Gene3D - 94 218 - -
Bach8g00856 334 MobiDBLite consensus disorder prediction 233 292 - -
Bach8g00856 334 SMART CactinC_cactus_3 89 217 - -
Bach8g00856 334 MobiDBLite consensus disorder prediction 213 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00856 Bach-Chr8 5576640 5579999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00856 1 290 C2H2 Transcription Factor Family AT2G32600 76.289 2.42e-136 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00856 K12826 - qsu:111995165 468.388