Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00852 ATGGAAGGACAGGTGCTAGAGGAACTTGTGGTCTGCAAGGATCAGCAGAATCAAATGACCATGATCAAGGGCAAGCGCACCAAGCGACAAAGGTTACCCTCTCCACTCCGCTTGGCCATGCCTACGCCTTCATCAACTTCATCGATCAGTGCCGGAAGAATTGCCAGCACTGACAATTCATCAACTTCATCGCCTGAATTGAGGGACAGCACACAGGAAGAAGAGGACATGGCTAACTGTTTGATTCTTCTTGCTCAAGGCAGCCATGCCCAGAAAGCTTCATCATCATCATCTGAACCCGTTAACGTTGCTCAACCCCACAGTAATTATGTCTACCAGTGCAAGACCTGTAACCGTTGCTTCTCTTCGTTCCAAGCCCTTGGTGGACACAGAGCCAGCCACAAGAAACCTAAGCCGAATAACATAGAAGAAAAGCAAGCTCTTACTTTTCTCGTTAATGAAAAGAGACATGATCTTTATGACCACGCCGCCGCCACCACAAGCACGGACTTGTCCTTGCAATTATCAAGCAGGGCTTTGTATAACACTGGTATGGCTAATAATAAACCCAAAGTCCATGAGTGTTCCATTTGTGGGGCTGAGTTCTCATCTGGGCAAGCCTTGGGGGGTCATATGAGGAGGCACAGAACGTTTGCCAATACGTCTGCAACAACATCTTCGAGCGAAGCCAAAAAACACAGAAATGTTTTGAAGTTGGACTTGAATCTTCCAGCACCAGAGGATGATTTGCAAGGGGAATCCAAGTTTCCCTTTCAATCCAAGGGAAAAGTTCTTGTCTTCTCGGCGTCTTCTCTCGTGGATTGCCCTTACTAA 834 0.4724 MEGQVLEELVVCKDQQNQMTMIKGKRTKRQRLPSPLRLAMPTPSSTSSISAGRIASTDNSSTSSPELRDSTQEEEDMANCLILLAQGSHAQKASSSSSEPVNVAQPHSNYVYQCKTCNRCFSSFQALGGHRASHKKPKPNNIEEKQALTFLVNEKRHDLYDHAAATTSTDLSLQLSSRALYNTGMANNKPKVHECSICGAEFSSGQALGGHMRRHRTFANTSATTSSSEAKKHRNVLKLDLNLPAPEDDLQGESKFPFQSKGKVLVFSASSLVDCPY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00852 277 Gene3D Classic Zinc Finger 110 215 - -
Bach8g00852 277 PANTHER ZINC FINGER PROTEIN ZAT5 31 255 - -
Bach8g00852 277 SUPERFAMILY beta-beta-alpha zinc fingers 111 215 IPR036236 -
Bach8g00852 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 193 215 IPR013087 -
Bach8g00852 277 Pfam C2H2-type zinc finger 192 216 - -
Bach8g00852 277 Pfam C2H2-type zinc finger 111 137 - -
Bach8g00852 277 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Bach8g00852 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Bach8g00852 277 MobiDBLite consensus disorder prediction 16 73 - -
Bach8g00852 277 SMART c2h2final6 193 215 IPR013087 -
Bach8g00852 277 SMART c2h2final6 112 134 IPR013087 -
Bach8g00852 277 ProSitePatterns Zinc finger C2H2 type domain signature. 195 215 IPR013087 -
Bach8g00852 277 MobiDBLite consensus disorder prediction 39 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00852 Bach-Chr8 5562840 5563673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00852 5 277 C2H2 Transcription Factor Family AT5G03510 42.295 1.27e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g00852 zf-C2H2_6 1.5e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00852 - - cave:132161809 265.774