Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00850 TCTGGCTTCAGCCTCAATTACATGTTCAACCTCTTCTCCTATCGGTTGAAGGATTGAACCGGAGGCCACACCAGAATCTGAAGACAATGGAGTCCCGGATGTCAACCGATGGAATTTCTCATCAGGATCACAAGTCTCCATCGGAACTGGGATATGCCAATTACGGGTGCTCGCACTATAAGAGGAGATGCAAGATCATAGCACCTTGTTGTGATAAAGTTTTCGATTGCAGACATTGCCACAATGAATCTCAGAACTCGATTGAAGTGGATCCTGTTGATCGCCATGACATTCCTCGCCATGATTTGAAGAGAATAATCTGTTCCTTGTGTAGCACGGAGCAAGATGTTCAACAGATGTGCATTAACTGTGGTGTTTGCATGGGAAATTACTTCTGCTCCAAGTGCAAGTTTTTTGATGATGATGTATCAAAAAAGCAATTCCATTGTGATGGGTGTGGAATCTGCAGAACTGGAGGAGAGGAGAACTGCTTCCATTGTAATAAATGTGGATGTTGCTATTCCATGTTGATGAAGGATTCACACCACTGTTTGGAAAAAGCAATGCATCACAATTGCCCTGTCTGCTTTGAGTTTCTTTTCGATACAACAAAGGACATCACTGTAATGCCATGTGGTCACGCTATACATTTGGGATGCGTGAAAGAAATGGAGCGGCACTATCAGTATGCATGCCCTGTTTGCTCAAAATCATTTTGTGATATGTCCCGCGTGTGGGAGAGATTGGACCGGGAGGTTGCATCAACACCTATGCCTGAAATTTATCAAAATAAGATGGTTTGGATTCTCTGTAATGACTGTGGGGAAACATCTGAGGTAAGCTTTCACATTGTGGCGCACAAGTGCCTCAAATGCAAATCCTACAATACAAGACAGACACAAGGTGGGCCTGCGTCATGCTCAACAAGGATTGAAGAGATGGTGAAATGATTAGTTCTCAACATTAAGAAACTTTTAGGTGATGCTTATTTGGATTAGTTGTTGGATATCCCGTTATGTTCACTTGGGAATAAAGGCACAAGTATCTGATTAATCATGGCAGAGACTATCTTACAAAAACATAGTTATTAAACCCCTTTTTT 1102 0.4211 MESRMSTDGISHQDHKSPSELGYANYGCSHYKRRCKIIAPCCDKVFDCRHCHNESQNSIEVDPVDRHDIPRHDLKRIICSLCSTEQDVQQMCINCGVCMGNYFCSKCKFFDDDVSKKQFHCDGCGICRTGGEENCFHCNKCGCCYSMLMKDSHHCLEKAMHHNCPVCFEFLFDTTKDITVMPCGHAIHLGCVKEMERHYQYACPVCSKSFCDMSRVWERLDREVASTPMPEIYQNKMVWILCNDCGETSEVSFHIVAHKCLKCKSYNTRQTQGGPASCSTRIEEMVK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00850 287 Pfam Zinc-ribbon 211 269 IPR039512 -
Bach8g00850 287 Pfam CHY zinc finger 28 109 IPR008913 GO:0008270
Bach8g00850 287 SMART ring_2 164 206 IPR001841 -
Bach8g00850 287 Gene3D - 235 279 - -
Bach8g00850 287 ProSiteProfiles Zinc finger RING-type profile. 164 207 IPR001841 -
Bach8g00850 287 FunFam RING finger and CHY zinc finger domain-containing protein 1 235 280 - -
Bach8g00850 287 Pfam Ring finger domain 163 206 IPR001841 -
Bach8g00850 287 SUPERFAMILY RING/U-box 162 213 - -
Bach8g00850 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 209 IPR013083 -
Bach8g00850 287 ProSiteProfiles Zinc finger CTCHY-type profile. 99 163 IPR017921 -
Bach8g00850 287 SUPERFAMILY Zinc hairpin stack 100 157 IPR037275 -
Bach8g00850 287 SUPERFAMILY CHY zinc finger-like 25 99 IPR037274 GO:0008270
Bach8g00850 287 ProSiteProfiles Zinc finger CHY-type profile. 21 97 IPR008913 GO:0008270
Bach8g00850 287 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 15 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00850 Bach-Chr8 5547569 5550559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00850 26 280 C2H2 Transcription Factor Family AT3G18290 39.695 8.19e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00850 K10144 - qsa:O6P43_006606 535.798