Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00849 ATGCTTCAAATAACCTGCATTTTCCTCCTCTCTCTCGTGGGTTCATTTTCACCCCTTGGAACAGCAATGCTGAACTTCACTCTCCCGGGTCAACACCCAGACCCAGAAGCTGTTGTCCACGAAGTTCACAGGAAAGTGAATGCTTCAATTGCAAGAAGGAAAATGCTGCAAGTATCAGGGAAAGACCAGTCGTCGTGCCTAACTGGGAACCCCATTGATGATTGCTGGAAATGCAACCCAAATTGGGCCAACAACCGGCAGAAGCTAGCTGATTGCGCAATTGGGTTCGGGCAGTACGCAAAGGGAGGCAAAGACGGCCAATTTTACATCGTCACAGATTCCTCAGACGACGACGTCGTCAACCCAAAACCGGGTACACTCAGATACGCAGTGATACAGAATGAACCCCTGTGGATTGTGTTCCCTAGTAACATGATGATAAAGCTATCTCAAGAACTCATCTTTAACAGCTACAAGACACTCGATGGCCGCGGCGCTGATGTACACATTGTTGGCGGTGGCTGTATTACTCTCCAGTATATAAGCAATGTCATTATACACAATATTCACATCCACCATTGTCATCCCTCCGGTAATACGAACATACGGTCTAGTCCAGAGCATTACGGGTATCGGACGGAAACAGACGGTGATGCGATATCGATATTCGGGTCGAAAGACATATGGATCGATCACTGCACACTGTCTCGGTGCAAAGACGGGTTGATAGACGCGGTGATGGGGTCCACCGGCATAACCATCTCCAACAACTTCTTTTCACATCACAACGAGGTGATGTTATTGGGTCACAGCGATGATTACCTCCCCGACTCGGGTATGCAGGTGACCATCGCCTTCAACCATTTTGGGGAGAAGCTGGTGCAGAGAATGCCACGTTGCCGACGTGGCTACATCCACGTGGTCAACAACGACTACACCCATTGGGAGATGTACGCTATCGAGGGTAGCGGTAACCCCACCATCAACAGCCAAGGGAATCGCTATTCGGCGCCGTCGAATCCCTACGCAAAGGAGGCGACGAAGAGGGTGGACACAGAAGAAGGGAAATGGAGGGATTGGAATTGGAGATCGGAGGGGGACTTAATGGTAAATGGAGCATTCTTTGTGGCTTCTGGGGAAGGGGTTGAGGTTAAGTACGAGAAGGCCTACAGTGTGGAACCCAAGTCTGCAGATCATATTGACATGCTCATCATGAACGCTGGGGTTCTCGGCAACGCAAGAGACAACAATCTGGGTATGTGGAATAGGGGACCCAAGAGTGGTGGTGGTGAAGGTGAAATTTCAATGTCAAACGGCCCAGAATACACTGATGATATGTCGAGGACTGCAAAGCTGCTTCCACCTGTGTATATTTTCACACTTGTATTCTCTTTTATTGGATTGTCATGCTTCTTTTCCTCTAATATACCTCTAGCCATCATTCTATTTCTATAA 1455 0.4852 MLQITCIFLLSLVGSFSPLGTAMLNFTLPGQHPDPEAVVHEVHRKVNASIARRKMLQVSGKDQSSCLTGNPIDDCWKCNPNWANNRQKLADCAIGFGQYAKGGKDGQFYIVTDSSDDDVVNPKPGTLRYAVIQNEPLWIVFPSNMMIKLSQELIFNSYKTLDGRGADVHIVGGGCITLQYISNVIIHNIHIHHCHPSGNTNIRSSPEHYGYRTETDGDAISIFGSKDIWIDHCTLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEKLVQRMPRCRRGYIHVVNNDYTHWEMYAIEGSGNPTINSQGNRYSAPSNPYAKEATKRVDTEEGKWRDWNWRSEGDLMVNGAFFVASGEGVEVKYEKAYSVEPKSADHIDMLIMNAGVLGNARDNNLGMWNRGPKSGGGEGEISMSNGPEYTDDMSRTAKLLPPVYIFTLVFSFIGLSCFFSSNIPLAIILFL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00849 484 Gene3D - 69 411 IPR012334 -
Bach8g00849 484 FunFam Pectate lyase 69 411 - -
Bach8g00849 484 Pfam Pectate lyase 154 333 IPR002022 -
Bach8g00849 484 SMART amb_all 144 341 IPR002022 -
Bach8g00849 484 SUPERFAMILY Pectin lyase-like 64 398 IPR011050 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 216 237 IPR018082 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 360 384 IPR018082 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 92 109 IPR018082 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 318 337 IPR018082 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 296 315 IPR018082 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 116 141 IPR018082 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 152 168 IPR018082 -
Bach8g00849 484 PRINTS Pollen allergen Amb family signature 389 412 IPR018082 -
Bach8g00849 484 PANTHER PECTATE LYASE 18-RELATED 26 412 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00849 Bach-Chr8 5538218 5540267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00849 1 481 Polysaccharide Lyase AT3G53190 70.816 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00849 K01728 - gmx:100775595 800.816