Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00848 ATGCAGGGAGAGCAATTGCATAAAGGGCCTTGGCTTCAAAAGGAAGATGAGCAACTCACTTCCTTCGTTACCCGTCTTGGGGAACGACGCTGGGATTCCCTCGCCAAAGTAGCTGGGCTTAGGAGGAGTGGGAAAAGTTGCAGGTTAAGGTGGATGAACTATCTTCGCCCAAGTCTTAAGCATAGCCCTTTTAGTATTGAAGAAGGGCGGTTAATTTTTCAACTTCAGCAGCAATGGGGTAATAAGTGGTCAAAGATTGCACGTAGTCTGCCAGGAAGAACAGACAATGAAATCAAGAATTACTGGAGAACCCATTTCAGAAAGAAGGAACAAGCTCAACGACAAGGTGGGTTACAATATAAAGTAGACAACACTGGACCAGATAAGAAAAGCATTGATTTGGTTGCACAGGATTACAACTATTCTAACCTTTACCGTCAAGAAAAAGATAGTTCCCTTCACACTTTTTCCTTATCAGACTGGGAATTGACAAGCTCACCCTACGAAATCCGGATATCGGATTGGATAGCAGAATTGCAAACAGATCAGAGTGAGATAGAACATCAACATATTGAACAGGACAGCAACAGCACTAGCACAGGGTCCTCCTTAGACTCCAATAATCTTATGTGGTCTGAAGATAACTATGATACATGGGAATATGCAGGTTCCCTCTGGGACATGAATTAA 690 0.4304 MQGEQLHKGPWLQKEDEQLTSFVTRLGERRWDSLAKVAGLRRSGKSCRLRWMNYLRPSLKHSPFSIEEGRLIFQLQQQWGNKWSKIARSLPGRTDNEIKNYWRTHFRKKEQAQRQGGLQYKVDNTGPDKKSIDLVAQDYNYSNLYRQEKDSSLHTFSLSDWELTSSPYEIRISDWIAELQTDQSEIEHQHIEQDSNSTSTGSSLDSNNLMWSEDNYDTWEYAGSLWDMN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00848 229 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Bach8g00848 229 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Bach8g00848 229 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Bach8g00848 229 Gene3D - 8 60 - -
Bach8g00848 229 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Bach8g00848 229 Gene3D - 62 131 - -
Bach8g00848 229 FunFam Myb transcription factor 8 60 - -
Bach8g00848 229 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 182 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach8g00848 229 SMART sant 60 108 IPR001005 -
Bach8g00848 229 SMART sant 7 57 IPR001005 -
Bach8g00848 229 CDD SANT 63 106 IPR001005 -
Bach8g00848 229 CDD SANT 10 55 IPR001005 -
Bach8g00848 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Bach8g00848 229 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Bach8g00848 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00848 Bach-Chr8 5534901 5536016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00848 39 226 MYB Transcription Factor Family AT3G53200 46.734 2.13e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach8g00848 Myb_DNA-binding 4.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00848 K09422 - gmx:100783472 282.722