Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00816 GGAATTTATGGGCCACCTTCTCAATCTACTCCATGGAACAGTCTTAATAAACAAATCAAGTTTCCATGACTGCCCCAAACTGCTTCAACTAAAAACATGCTCTACTAGAAAAATTGCCAAATTTCAGAAATGCACTGTTGCACGACTGTCTTTTAAAGGCTGTACAGAATTGTCAGATCATATTAAGAACTCTTTCAACCACAAGGTTTACATTCATAATGGAGAAGATTTGAATGCCCTTCCTCATATACAAACAATAAGAAAATTTCCTAAGGAGGAGCTTTCTGCAAAAGTTGTCATGGTCAGATTTGATCCTAACGTATTGTTCAAGCAAGAGTCTGACCAGAATACTCTATCAGTTGTTAATGCATTACATACGATAAAATATTTATATGAAGCTGGGGCAAAAGTAATCCTGGCCAGTGATTGGAATATAAATAATTCAGAATTTCTTACTACAGAGTCTGTTGCAGATTTCTTGTCGGAAATTCTTCGAATTAAAGTTGTTCCGCTACAATGTATTTCTTGTAATAACCTATCAAAGATGGAAGAATTCAAGAAAGCAGATATCCTTCTTATTGAGAACCTTTCCAATATTAAGGAGGAAGTTGCCAATTGTTCGAAGTTTGCTGAAGTATTAGCATCAGGAGTTGATATCTTTGTTAATGACTCCTTCTCTCACTCTCATAAAGCCCTTGCATCAACTGTTGGTGTTACTCGTTTCTGCTATGCCTGTAGAGCTGGTTTCCACTTTGAAGAGAGCCTCTCTTTACTGAATAATATTGCAGAAGCCAGCAGGAAACCGTATGTTGCAATTATTGGAGGGGGTCATCTTTATGATAAAGCAGCTGCCTTGCATTTTTTAGCTTCCAGATGCCAAGGGTTGATCTTTGTTGGCAAGATATCGTTTCAAATAATGCATGCATTAGGGGTATCTGTTCCCTTTAATTTGGTGGAGCATGAAGCATGTAATGAAGCTCTAGATATAATTCGACTTGCTAGAGATAGAAATATACAGATTCTGTATCCTATAGATTTTTGGTGCAGAAATGAACATGATCAAAAGTACCTGAAAACATTTCCTGCTTATGGCATATTGGATGGTTGGGTACCTGTCGACCTTGGACCTGCGTCATTGGATGAAATAGGCTCTGTGCTTACAAACTCAAAGAAAATTATATGGATTGGTCCAGTGAAATTTACTGTTTCAAGCAAATACATAAATGGAGCATCCAAATTGGCAAAAATGCTTGATCAACTAAGCTTAAGCAACTGTGACATAACTGTTGTTGGGAATATGGCATGCCAAGTAGTGAGGCAGGAATTGAGTTCTTTATCCTCCATAAATATGATTGAGAATGCTTCAGTTGTATGGGAATTTCTCAAAGGACGAAAGCTCCCTGGTGTTATGGCCTTAGACAGAGCATACCCATTTGAGATCAACTGGAACGACACATATTCTGACCCAGCTCAACCTCTGGTTGTTGATATAGGAAGTGGTAATGGACTTTTTCTTCTGGAAATGGCAAGAAGGAGGACAGATTTGAACTTCCTTGGTTTGGAGATTAATGGAAAGCTTGTGAGGCGCTGTCTGGATTCTGTTAATCAGTTTGGTATAAAGAATGGGTACTTTATTACAACTAATGCAACATCAACATTCCGTTCCATTGTTTCTACTTACCCAGGACAGTTGATTCTTGTTTCGATACAGTGTCCAAATCCTGATTTCAATAAACCTGAGCATAGATGGAGGATGCTGCAGAGGTCTTTAATTGAAGCAGTAACAGATCTCCTTACATCTGGCGGGAAGGTCTTTCTGCAATCTGATGTAGAAGCTGTTGCTATGAGAATGAAAGAACAATTTTTGAGATATAGCAAGGGTAAGCTTGATTTGGTGCATGACCATGATGGGTGGCTGGAGGAAAATCCATTTGGAGTTAGGTCAGATTGGGAGCAACACGTTATAGAACGCGGGGCTCCTATGTACCGATTGATGTTTTCTAAATCAAGCAAAGATCCTTTTTTAGTCTCCTGTCCTGCTTCTAACATGACGAGCCAAGCTGAATCCTCAGATTCCAAGGGAACGAAAAGGGACTTCAGCACGGCGATTTTGGAACGCAAAAAGGCGCCAAATCGGCTCGTTGTTGACGAGGCCATCAACGATGATAACTCTGTGGTCGCGCTTCACCCAGACACCATGGAAAAGCTCCAACTTTTTCGAGGCGACACGATTTTGATTAAGGGAAAGAAAAGGAGAGATACAATCTGTATTGCTCTCGCTGATGACACATGTGATGAACCCAAAATAAGGATGAACAAAGTTGTGAGGAACAACCTCAGGGTTAGACTAGGTGATGTTGTTTCTGTGCATCAATGTGCTGATGTCAAATATGGAAAGCGGGTTCACATTCTTCCTATAGATGACACTATTGAAGGGTTAACTGGAAATCTCTTTGATGCATATTTAAAACCTTATTTTCTGGAGGCATATCGCCCAGTGAGGAAGGGTGACCTTTTCCTTGTGAGAGGGGGAATGAGAAGTGTCGAATTCAAGGTTATCGAAACTGACCCTCCAGAATACTGTGTTGTTGCCCCGGACACTGAGATCTTCTGTGATGGGGATCCTGTGAAAAGGGAAGATGAGAACCGGTTAGATGAGGTTGGTTATGATGACGTTGGTGGCGTTAGAAAGCAGATGGCTCAGATTCGGGAACTAGTGGAACTGCCTCTGAGGCATCCACAATTATTCAAGTCTATTGGTGTTAAGCCACCAAAAGGAATTCTATTATATGGACCCCCTGGTTCTGGTAAGACTTTAATTGCCCGAGCTGTTGCAAATGAAACTGGTGCCTTCTTTTTCTGCATCAATGGTCCTGAGATCATGTCAAAACTAGCTGGTGAGAGTGAAAGCAATCTGAGGAAAGCATTTGAGGAAGCTGAGAAGAATGCACCATCCATTATCTTTATCGATGAGATAGATTCGATAGCTCCCAAGAGGGAGAAAACTCATGGAGAAGTTGAGAGAAGGATTGTTTCTCAGCTCTTGACACTCATGGATGGGCTAAAATCACGTGCTCATGTAATTGTTATTGGAGCTACCAATCGCCCCAACAGCATTGACCCTGCACTTAGGAGATTTGGAAGGTTTGATCGGGAGATAGATATTGGTGTCCCAGATGAAGTTGGACGTCTTGAGGTTCTACGCATTCACACAAAAAATATGAAGCTTGCTGAAGACGTAATATCTCACTTCTTTTTCCCCCTAAGTTGTGGTTTTATTTTCAGTGTTCTAAAATAA 3298 0.4066 MGHLLNLLHGTVLINKSSFHDCPKLLQLKTCSTRKIAKFQKCTVARLSFKGCTELSDHIKNSFNHKVYIHNGEDLNALPHIQTIRKFPKEELSAKVVMVRFDPNVLFKQESDQNTLSVVNALHTIKYLYEAGAKVILASDWNINNSEFLTTESVADFLSEILRIKVVPLQCISCNNLSKMEEFKKADILLIENLSNIKEEVANCSKFAEVLASGVDIFVNDSFSHSHKALASTVGVTRFCYACRAGFHFEESLSLLNNIAEASRKPYVAIIGGGHLYDKAAALHFLASRCQGLIFVGKISFQIMHALGVSVPFNLVEHEACNEALDIIRLARDRNIQILYPIDFWCRNEHDQKYLKTFPAYGILDGWVPVDLGPASLDEIGSVLTNSKKIIWIGPVKFTVSSKYINGASKLAKMLDQLSLSNCDITVVGNMACQVVRQELSSLSSINMIENASVVWEFLKGRKLPGVMALDRAYPFEINWNDTYSDPAQPLVVDIGSGNGLFLLEMARRRTDLNFLGLEINGKLVRRCLDSVNQFGIKNGYFITTNATSTFRSIVSTYPGQLILVSIQCPNPDFNKPEHRWRMLQRSLIEAVTDLLTSGGKVFLQSDVEAVAMRMKEQFLRYSKGKLDLVHDHDGWLEENPFGVRSDWEQHVIERGAPMYRLMFSKSSKDPFLVSCPASNMTSQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGDTILIKGKKRRDTICIALADDTCDEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVHILPIDDTIEGLTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCDGDPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVISHFFFPLSCGFIFSVLK 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00816 1096 CDD RecA-like_CDC48_r1-like 889 1054 - -
Bach8g00816 1096 PANTHER PHOSPHOGLYCERATE KINASE 81 481 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 FunFam Transitional endoplasmic reticulum ATPase 886 1054 - -
Bach8g00816 1096 FunFam Phosphoglycerate kinase 253 462 - -
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 214 236 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 245 267 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 91 107 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 268 287 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 448 465 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 389 414 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 112 134 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 PRINTS Phosphoglycerate kinase family signature 186 201 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 SMART CDC48_2_2 810 876 IPR004201 -
Bach8g00816 1096 SUPERFAMILY Cdc48 domain 2-like 792 884 IPR029067 -
Bach8g00816 1096 Pfam Phosphoglycerate kinase 91 430 IPR001576 GO:0004618|GO:0006096
Bach8g00816 1096 CDD AdoMet_MTases 492 605 - -
Bach8g00816 1096 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 483 665 IPR029063 -
Bach8g00816 1096 SMART CDC48_N_2 710 793 IPR003338 -
Bach8g00816 1096 Pfam Cell division protein 48 (CDC48), domain 2 811 875 IPR004201 -
Bach8g00816 1096 FunFam Transitional endoplasmic reticulum ATPase 687 792 - -
Bach8g00816 1096 SMART AAA_5 921 1057 IPR003593 GO:0016887
Bach8g00816 1096 Gene3D - 1056 1078 - -
Bach8g00816 1096 SUPERFAMILY Phosphoglycerate kinase 88 471 IPR036043 GO:0004618|GO:0006096
Bach8g00816 1096 SUPERFAMILY ADC-like 707 790 IPR009010 -
Bach8g00816 1096 Gene3D - 884 1055 IPR027417 -
Bach8g00816 1096 Gene3D - 76 257 IPR015824 GO:0004618|GO:0006096
Bach8g00816 1096 Gene3D - 260 470 IPR015824 GO:0004618|GO:0006096
Bach8g00816 1096 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 451 666 IPR003358 GO:0006400|GO:0008176
Bach8g00816 1096 Pfam ATPase family associated with various cellular activities (AAA) 925 1054 IPR003959 GO:0005524|GO:0016887
Bach8g00816 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 886 1083 IPR027417 -
Bach8g00816 1096 FunFam Cell division control 48 793 889 - -
Bach8g00816 1096 ProSitePatterns AAA-protein family signature. 1025 1043 IPR003960 GO:0005524|GO:0016887
Bach8g00816 1096 Gene3D Vaccinia Virus protein VP39 471 672 IPR029063 -
Bach8g00816 1096 Gene3D - 793 877 - -
Bach8g00816 1096 FunFam Phosphoglycerate kinase 469 667 - -
Bach8g00816 1096 Pfam Cell division protein 48 (CDC48), N-terminal domain 710 791 IPR003338 -
Bach8g00816 1096 Pfam Putative methyltransferase 489 661 IPR003358 GO:0006400|GO:0008176
Bach8g00816 1096 Gene3D - 687 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00816 Bach-Chr8 5366098 5378322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00816 884 1090 Calmodulin-binding Proteins AT3G56690 46.890 4.90e-50 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00816 K00927 - gmx:100778356 977.237