Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00804 GCAAAACCTAGAGCTTCGTCATTTTCTGTAAGAAAAAAGGCAACATTTTCCCTGGCCTTTTTCTGGTAACATGGAAACAGTGACCAGCAAGATCAATGGCGCTTACCACCATGGCTCCACTGAGAGCTTCTGCTTGACTAGTGCCACTGGTGGGGCAGCAGCAGCTGACCCATTGAATTGGGGCGTGGCGGCTGAGTCGCTCAAAGGCAGCCATTTGGACGAGGTGAAGCGCATGGTGGCTGAGTACCGGAAGCCGGTGGTGCGGCTCGGAGGCGAGACACTCACGATTTCCCAGGTTGCTGCCGTCTCCACACATGACAAAGGCGTTAAGGTTCAGCTGTCGGAGTCGGCTAGAGCCGGCGTTAAGGCCAGCAGTGACTGGGTCATGAACAGCATGGACAACGGTACTGACAGCTATGGAGTCACCACTGGCTTTGGTGCAACATCACACAGGAGAACCAAACAAGGTGCTGCTCTCCAAAAGGAGCTCATTCGGTTTTTGAATGCTGGAATATTTGGCAACGGAACAGAGACAATTCACACTCTGCCTCACACAGCAACCAGAGCAGCCATGCTCGTCAGAATCAACACTCTCCTCCAAGGTTACTCAGGGATTAGATTTGAGGTCCTAGAAGCCATCACAAAGCTGATAAACAACAACGTCACCCCATGCTTGCCCCTTCGTGGGACCATCACAGCTTCTGGTGATCTTGTTCCTCTTTCTTACATTGCCGGTTTGCTAACTGGCCGACCAAATTCCAAAGCTGTTGGACCCTCTGGAGAGATCCTCAATGCCAAGGAAGCTTTCCAACAAGCCGGCATCGAATCAGAGTTCTTTGAATTGCAGCCCAAGGAAGGGCTTGCTCTTGTTAATGGTACTGCTGTTGGTTCTGGTTTGGCTTCCATGGTTCTTTTCGAGGCCAACATATTAGCGGTGTTGTCAGAGGTTCTATCAGCAATTTTCGCTGAAGTGATGCAAGGGAAGCCTGAATTCACTGACCATTTGACTCATAAATTGAAGCACCATCCTGGTCAAATTGAAGCTGCTGCTATAATGGAACACATTTTGGATGGAAGCTCCTATGTTAAAGCTGCTAAGAAGTTGCATGAGATGGATCCCTTGCAGAAACCTAAACAGGATCGTTATGCCCTTCGAACTTCACCCCAATGGCTTGGCCCTCAGATTGAAGTGATCAGATTTGCAACAAAATCAATTGAGAGAGAGATAAACTCTGTGAATGATAACCCTTTGATTGATGTTTCAAGGAATAAGGCTTTGCACGGTGGGAATTTCCAGGGAACCCCAATTGGTGTCTCAATGGACAATACTCGTTTGGCTCTTGCTTCAATTGGCAAACTCATGTTTGCTCAATTCTCTGAGCTTGTTAATGATTTCTACAACAACGGTTTGCCATCAAATCTCACTGCCAGCAGAAACCCCAGCTTGGATTACGGTTTCAAGGGTGCTGAGATTGCCATGGCATCTTATTGCTCTGAGCTCCAATACCTTGCAAACCCAGTTACAAGCCATGTCCAGAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTGGGTTTGATTTCTTCTAGAAAAACAAAGGAAGCTGTTGAGATCCTGCAACTCATGTCTTCCACATTCTTGATTGCACTCTGCCAAGCAAATGACTTGAGGCATTTGGAGGAGAATTTGAAGAACACAGTCAAGAACACTATCAGCCAAGTTGCAAAGAGAACACTTACCACTGGTGTTAATGGAGAACTCCACCCTTCTAGATTTGCAGAGAAGGATTTGCTCAAAGTGGTTGAGAGGGAGTATGTGTTTGCCTACGCCGATGATCCCTGCAGCGCCACCTACCCATTGATGCAGAAACTAAGGCAGGTTCTCGTGGAACATGCATTAGTCAATGCAGAGAATGAGAAGAATTCCAACACATCCATCTTCCAAAAGATTGCAACTTTCGAGGAAGAGTTGAAGTCTCAATTGCCAAAGGAAATTGAAGGTGCAAGATTGGCATATGATAATGGCAACTCAGCAATTCCGAACAGGATTAAGGAATGCAGGTCTTACCCATTGTACAAGTTTGTCAGAGAGGAACTGGGAACTGTGTTGCTGACAGGAGAAAAGGTGAGGTCCCCAGGTGAGGAGTGTGAGAAAGTGTTCACAGCAATGTGCCAGGGTAAGATTATTGATCCTCTGCTGGAATGCCTTGGGGAGTGGAACGGTGCACCTCTACCAATCTGCTAGTTTGATCGGTTTCTTTGAAGAATACCTCTACATCTGTCCATCTGCAGCCATCAATAAACATTTGGGTTTATCCGCCAAGATATGAAGCTAACGGCAAATCCTTTTATAAAGCGTTGTTTTGGTTCCTTCATGTTTCGAGGAACGTGTAATATAAAGTATTGTGATCAAGTTTTTATTTTTTTATTTTTTTCCATTCCCTTTTAGGGTGCCCATAGATGTAAAGGATGTGGGGTTCTTCGTAAGAATGCTTCTTTTGAATAGAATTCTATCCTAATGGTCTTT 2527 0.459 METVTSKINGAYHHGSTESFCLTSATGGAAAADPLNWGVAAESLKGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAVSTHDKGVKVQLSESARAGVKASSDWVMNSMDNGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTETIHTLPHTATRAAMLVRINTLLQGYSGIRFEVLEAITKLINNNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFQQAGIESEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTKEAVEILQLMSSTFLIALCQANDLRHLEENLKNTVKNTISQVAKRTLTTGVNGELHPSRFAEKDLLKVVEREYVFAYADDPCSATYPLMQKLRQVLVEHALVNAENEKNSNTSIFQKIATFEEELKSQLPKEIEGARLAYDNGNSAIPNRIKECRSYPLYKFVREELGTVLLTGEKVRSPGEECEKVFTAMCQGKIIDPLLECLGEWNGAPLPIC 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00804 724 FunFam Phenylalanine ammonia-lyase 271 573 - -
Bach8g00804 724 PANTHER HISTIDINE AMMONIA-LYASE 28 724 IPR001106 -
Bach8g00804 724 SUPERFAMILY L-aspartase-like 33 724 IPR008948 GO:0003824
Bach8g00804 724 Gene3D Fumarase/aspartase (Central domain) 271 719 - -
Bach8g00804 724 NCBIfam phenylalanine ammonia-lyase 33 713 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bach8g00804 724 FunFam Phenylalanine ammonia-lyase 24 270 - -
Bach8g00804 724 CDD PAL-HAL 69 534 IPR001106 -
Bach8g00804 724 Gene3D - 537 658 IPR023144 -
Bach8g00804 724 FunFam Phenylalanine ammonia-lyase 537 658 - -
Bach8g00804 724 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 206 222 IPR022313 GO:0016841
Bach8g00804 724 Pfam Aromatic amino acid lyase 71 546 IPR001106 -
Bach8g00804 724 Gene3D - 24 270 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00804 Bach-Chr8 5285175 5288569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00804 31 724 Monolignol Biosynthesis Gene Families AT2G37040 85.159 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00804 K10775 - gmx:100811101 1274.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00804 8 5285175 5288569 Bach8g00804 8 5285175 5288569 ECH