Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00802 GCCGTTGAGGCTTCTTCGTAAAACCTTCTCTTTTGAAATCTTATCCATTAAAGCGGCGACACCATGTCTACCTCTGCTGCTTCTTTAGCCCTTCCTACTCTTACATCCAAATCTCAATCACTCTCATATTCGAAACAAGCTGCATTCTCTCCCTATTATACCTCTTCGGTGCCTTTGAGACTTGACTCAAAGCCCATATGTATTTCTGCTTCTTTTCTCCACTTGGGCAGAGCCTGTCCGAGTTTGTCATCTCGTTTCGTCCGCAACGTAACTCTTTCTTCTGAGTTTGACCAAGAAGAGGATGTCTTGAGTGATGAAGAGGAACCCAGCTTCTCCCCGGACCTTAAGCTCTTTGTGGGTAATCTTCCTTTCAGCGTTGACAGTGCCCGGCTGGCTGATTTGTTCGGAAACGCTGGTTATGTAGAGATGGTTGAGGTAATTTATGATAAAACGACCGGAAGAAGCAGGGGATTTGGTTTTGTGACAATGTCATCCACTGAGGAAGTTGAAGCCGCCGCTCAACAATTCAATGGTTATGAACTAGATGGAAGGGCATTGAGAGTAAATTATGGACCTCCTCCTTCTCCTCGGAGGGAAAATTCCCCCTTTAGAGGTGGTCCTGTTTCAGACACCGGAAACCAAGTTCATGTTGGTAATCTTGCATGGAATGTTGATCACTCGGCACTTGAGTCATTGTTTGGTGAGCAAGGGAAGGTTTTGGAAGCAAAGGTAATTTATGACAGGGAAAGTGGAAGATCGAGGGGCTTTGGATATGTGACTTACAGTCGTGCTGAAGAGGTTAACAATGCCATTGAGTCCTTAGACGGTGTGGACTTGAATGGCAGAGCTATTCGGGTGTCATTAGCAAATGCTAAGCCAAGGCGTCAATTTTGATCAGTGTTCTGATTTTACCTGATCACGAGAGGACTTCAGGTTGTTGGGAGATATGTAGCTGATGTTCTCCAACTTGTTTAGAAATATAGTCCTTGTACTGCAACTGCATCTATGCACAGCAGAAGTGTCTGATTTACGTCTTTCTTCCTGAAGAAGTGTCTATGCTCCAAATACTAAGGTTTTCTTTAGAATCTGATTGAAAGCCTGCAATTTTATCGCTTTCAGTTTTGTTAGTAGATAACTCATCAGATTTTATTTGTTACGCCATGATGTTATGTGGAAGAATTTTATCATCGCAATTGTGCCAGCAGGATTATCAATCACTTTGATGTTAT 1229 0.4312 MSTSAASLALPTLTSKSQSLSYSKQAAFSPYYTSSVPLRLDSKPICISASFLHLGRACPSLSSRFVRNVTLSSEFDQEEDVLSDEEEPSFSPDLKLFVGNLPFSVDSARLADLFGNAGYVEMVEVIYDKTTGRSRGFGFVTMSSTEEVEAAAQQFNGYELDGRALRVNYGPPPSPRRENSPFRGGPVSDTGNQVHVGNLAWNVDHSALESLFGEQGKVLEAKVIYDRESGRSRGFGYVTYSRAEEVNNAIESLDGVDLNGRAIRVSLANAKPRRQF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00802 276 PANTHER OS02G0815200 PROTEIN 15 274 - -
Bach8g00802 276 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 172 IPR000504 GO:0003723
Bach8g00802 276 CDD RRM2_NsCP33_like 193 268 - -
Bach8g00802 276 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 195 264 IPR000504 GO:0003723
Bach8g00802 276 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 166 IPR000504 GO:0003723
Bach8g00802 276 MobiDBLite consensus disorder prediction 169 189 - -
Bach8g00802 276 SUPERFAMILY RNA-binding domain, RBD 89 188 IPR035979 GO:0003676
Bach8g00802 276 Gene3D - 190 276 IPR012677 -
Bach8g00802 276 Gene3D - 67 189 IPR012677 -
Bach8g00802 276 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 192 270 IPR000504 GO:0003723
Bach8g00802 276 SUPERFAMILY RNA-binding domain, RBD 189 275 IPR035979 GO:0003676
Bach8g00802 276 SMART rrm1_1 95 168 IPR000504 GO:0003723
Bach8g00802 276 SMART rrm1_1 193 266 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00802 Bach-Chr8 5262785 5265162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00802 96 275 Eukaryotic Initiation Factors Gene Family AT4G34110 32.222 9.79e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00802 - - qsa:O6P43_010289 375.17