Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00797 ATGCTGGGATTATCTTTTAATTTGCAGATGTGCCAAATCTTTGTGAAGACTTTGACTGGAACGACAATCACTCTAGAGGTGGAGACCTCCAACACCATTGATAACATGAAAGCGAAGATTCAAGATAAAGAAGGGATTCCACCGGATCAGCAGAGGCTCATTTCCGCAGGCAAACACCTCGCCAATTACGACATCCAGAAAGAATCTACCTTTCATCTTGTTCTTCGTTTGAGTGGAGGTATGCAAATCTTTGTGAAAACCCTAACCGGGAAAACCATTACCCTGGAGGTCGAGAGCTCTGATACCATTGATAACGTCAAGTCCAAGATTCAGGACAAAGAAGGTATCCCTCCAGATCAGCAGAGGCTCATCTTCGCTGGCAAGCAATTAGAGGATGGACGAACGCTTGCTGATTACAACATCCAGAAAGAATCGACTCTGCATCTCGTGCTTCGATTGAGGGGTGGCATGCAAATCTTTGTAAAGAGTCTTGGTGGCACAAGCTTCACTTTGGAAGTTGAGAGCTCAGACACAATCGAGAGCGTTAAAGCGAAAATTCAGAAGTGGGAAAGAATCCCTCTCGAGCTACAGTGTTTGGTCTTCGATGAGAAGCGATTAGAAGATAGCAAAACGCTTGCCGATTACAATATTCAGAATGACGCCACGATTTCTATCTTACTTCGGCTCAGAGGAGGGATGCAGATATTCGTGAAGACGTTTACAGGGAAGACCATCACTTTAGAGGTTGAGAGTTCCGATTCCGTCTATGACGTGAAAGCCAAGATTCAGGAGAAGGAGGACATTCCACCAGATCAGCAGCGTCTCAGTAACTTTTCTGGGAAACACCTTGAAGATGGTCGTACTCTTGCTGATTACAACATTCAGAAAGAATCCACGCTTCACCTTGACCGGAACATAAATTGTGAATTCCATTTCAACTTCTCTGCTTCGAGTCTTCGTTTTAAGGCTTCCACCTTTTCAACCAAGATTGCATTCTCCTGGCAATTTGACATGTCATTAGAGCTCCCACAAAATAACTTAGGACAAACAAGTCATACATTTAAAAAAAAGCTTGCCGATTACAATATTCAGAATGAGTCCACGATTGGCATGTCACTTCGGCTCAGAGGAGGGATGCAGATATTCGAGAAGACGTTTACAGGGAAGACCATCACTTTGGAGGTTGAGAGTTACCATATCTTCGATGACGTGAAAGGCAAGATTCAGGCGAAGGAGGATATTCCAGCAGCGTCTCAGTAA 1260 0.4413 MLGLSFNLQMCQIFVKTLTGTTITLEVETSNTIDNMKAKIQDKEGIPPDQQRLISAGKHLANYDIQKESTFHLVLRLSGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKSLGGTSFTLEVESSDTIESVKAKIQKWERIPLELQCLVFDEKRLEDSKTLADYNIQNDATISILLRLRGGMQIFVKTFTGKTITLEVESSDSVYDVKAKIQEKEDIPPDQQRLSNFSGKHLEDGRTLADYNIQKESTLHLDRNINCEFHFNFSASSLRFKASTFSTKIAFSWQFDMSLELPQNNLGQTSHTFKKKLADYNIQNESTIGMSLRLRGGMQIFEKTFTGKTITLEVESYHIFDDVKGKIQAKEDIPAASQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00797 419 SUPERFAMILY Ubiquitin-like 60 157 IPR029071 -
Bach8g00797 419 FunFam Polyubiquitin 3 81 156 - -
Bach8g00797 419 FunFam Polyubiquitin-C 233 308 - -
Bach8g00797 419 ProSiteProfiles Ubiquitin domain profile. 11 80 IPR000626 GO:0005515
Bach8g00797 419 FunFam Polyubiquitin-C 11 80 - -
Bach8g00797 419 FunFam Polyubiquitin-C 157 232 - -
Bach8g00797 419 SUPERFAMILY Ubiquitin-like 155 232 IPR029071 -
Bach8g00797 419 ProSiteProfiles Ubiquitin domain profile. 157 232 IPR000626 GO:0005515
Bach8g00797 419 SUPERFAMILY Ubiquitin-like 232 302 IPR029071 -
Bach8g00797 419 Gene3D - 7 80 - -
Bach8g00797 419 Gene3D - 81 156 - -
Bach8g00797 419 Gene3D - 157 233 - -
Bach8g00797 419 PRINTS Ubiquitin signature 133 154 IPR019956 -
Bach8g00797 419 PRINTS Ubiquitin signature 91 111 IPR019956 -
Bach8g00797 419 PRINTS Ubiquitin signature 112 132 IPR019956 -
Bach8g00797 419 SUPERFAMILY Ubiquitin-like 358 419 IPR029071 -
Bach8g00797 419 Pfam Ubiquitin family 13 77 IPR000626 GO:0005515
Bach8g00797 419 Pfam Ubiquitin family 235 302 IPR000626 GO:0005515
Bach8g00797 419 Pfam Ubiquitin family 159 230 IPR000626 GO:0005515
Bach8g00797 419 Pfam Ubiquitin family 83 154 IPR000626 GO:0005515
Bach8g00797 419 SUPERFAMILY Ubiquitin-like 10 80 IPR029071 -
Bach8g00797 419 Gene3D - 377 419 - -
Bach8g00797 419 ProSiteProfiles Ubiquitin domain profile. 233 302 IPR000626 GO:0005515
Bach8g00797 419 ProSiteProfiles Ubiquitin domain profile. 81 156 IPR000626 GO:0005515
Bach8g00797 419 SMART ubq_7 81 152 IPR000626 GO:0005515
Bach8g00797 419 SMART ubq_7 11 76 IPR000626 GO:0005515
Bach8g00797 419 SMART ubq_7 233 305 IPR000626 GO:0005515
Bach8g00797 419 SMART ubq_7 157 228 IPR000626 GO:0005515
Bach8g00797 419 PANTHER UBIQUITIN 379 419 - -
Bach8g00797 419 CDD Ubl_ubiquitin 81 156 - -
Bach8g00797 419 ProSitePatterns Ubiquitin domain signature. 107 132 IPR019954 -
Bach8g00797 419 Gene3D - 234 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00797 Bach-Chr8 5224349 5226297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00797 12 81 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 77.632 3.39e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00797 K08770 - egr:104451464 525.398