Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00787 CTCTTGCAGTGGTCGCTGGAAGTTTTCAGTGTTTTCGCGCAAATTTCAGAGCTCTTGCAGTTTTCGTTGTTGCTGTTTTTCTCTTTCATCTATGGCAACCGAAGGGGAAGACGTTGCCAAGAGGAACGACGAAGGCGTTGATACCAGTACCAGTAGAGCTGATATCCCAATTCAAAAGGGTGTAGAATCAACTGAAATAACAGAAGAACATCCAAGTGGACAACATGGGAGAAGGCAAAACCTCATCTTGGAGATACCCCAAAGAACTCTGGAGGAAACTAGAGAAGAATTTCTGAGAATAAACATGCCTCCAACCCCAACTCCCAGAAGAGTTAATTTTTCCTCCATTCCAAGCCCTAGTTTCTCCAAAGTCAATGAATCCTCAGGTCCCACCTTATTAAAAAATAAATCAACTATTAAATCCCTTCTTCCCAAGCTCAGTTTTAAATTTCACAATACTAGTTCAGAGATTGAGAGAGCTACTACCCTAGCACCTGAAGCTTCACCAATGGTGGCACAGAGAAGGCCTCTAATTTCAAGGACATTGTCTCTAACAAAGTTGATCACACCCAGAGGGAAGAAAACTTCATCCTTACCAGTAACCCCTATTGCTCACTCAAATGCAGAGTCTGCACATGGAGGAAATTTCGCTTATCCTGCAACATCTTCTAAAAAAGAGGTGCAAATACCCATTCATCGTTCTCGCTCAGTTCCTCTGCTTAGCGAAGATGGGAACGTACCAGTAGGTGGCATTTTTCGTGTAGTTCCCACCACGCCACGGCTAGCTGAGAAGACTGCGACAACAATATCTACCTCATCTCCACCTGATGATTCTGGTGGGAATGAGGATGATGGCGAAGATATTCTTGAAGAAGAAGCTGTTTGCAGAATCTGTTTGATTGAATTGGGAGAAGGTGGTGATACTCTCAAAATGGAGTGTAGCTGCAAAGGTGAACTTGCCCTGGCACACCAAGAGTGCGCTGTCAAATGGTTTAGCATTAAAGGTAATAAAATTTGTGATATCTGCAAGCAAGAGGTTCAGAACCTACCTGTCACCCTTTTACGAGTCCAAAGTCAGGCTCTTAACTTGCAAGGAACCAGAGCTCTGCAAGCAGAGATTGTTCAATACAGGGTTTGGCAGGATGTCCCCATTCTTGTCATTGTCAGCATGCTGGCTTACTTTTGTTTTCTTGAGCAGCTTCTTGTTTCACATTTGGGATCTGGTGCCATTGCCATATCTCTCCCATTTTCTTGTATAATGGGTCTTCTTGCGAGCATGACATCCACCACAATGGTTATGAGACAGCATGTCTGGGTTTATGCAACTGTCCAGTTTGGTTTGGTGGTTTTCGCTGGGCATCTATTCTACTCTTTGCTCCATAAGCAAGCTGTTCTATCCATTCTGTTAGCTACATTTTCTGGGTTTGGAGCAACTATGTGTGGAACTTCTATTCTTATTGAGATTTTGAAATGGAGGAGAAGGTGGCTTGCTAGGTTGGATCAACAGCGTGGCTCGCAGGAAGTGACGCAGTCTAATCAATCATCTGCAACTACCCATCAAGCTCAGAGTGATCCTCAACATCGCCAAAGTGAAATGGGTGATTCACCTGTACACGGCGGCTGACCCCATATTCTTTTTACGTTATTTGCCTTGCGCGTTGGTTTCATAAATGCGTTTGGCCGCACATAGAAAATATTGTACATGCTGGTTTGAGCAAATTACCAAGAGATTTAGTGATTAGTGGATCGTGGGGTGTAGCAACTAGAGTCTAGAGAATGGCCACGGAAACAAGAAAACGAGAACAGAGAGAAGGTCCTCTTTGGAATGCAACCAAAAGATACGGTAATCTAGTAGGTTTTTTGTTTATTAATACAAGGGAAATTACCAAAACTCAAATGTACGAGCTGTTCAATTTTCATCCACAAATCAAG 1932 0.4327 MATEGEDVAKRNDEGVDTSTSRADIPIQKGVESTEITEEHPSGQHGRRQNLILEIPQRTLEETREEFLRINMPPTPTPRRVNFSSIPSPSFSKVNESSGPTLLKNKSTIKSLLPKLSFKFHNTSSEIERATTLAPEASPMVAQRRPLISRTLSLTKLITPRGKKTSSLPVTPIAHSNAESAHGGNFAYPATSSKKEVQIPIHRSRSVPLLSEDGNVPVGGIFRVVPTTPRLAEKTATTISTSSPPDDSGGNEDDGEDILEEEAVCRICLIELGEGGDTLKMECSCKGELALAHQECAVKWFSIKGNKICDICKQEVQNLPVTLLRVQSQALNLQGTRALQAEIVQYRVWQDVPILVIVSMLAYFCFLEQLLVSHLGSGAIAISLPFSCIMGLLASMTSTTMVMRQHVWVYATVQFGLVVFAGHLFYSLLHKQAVLSILLATFSGFGATMCGTSILIEILKWRRRWLARLDQQRGSQEVTQSNQSSATTHQAQSDPQHRQSEMGDSPVHGG 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00787 510 MobiDBLite consensus disorder prediction 476 500 - -
Bach8g00787 510 ProSiteProfiles Zinc finger RING-CH-type profile. 257 319 IPR011016 GO:0008270
Bach8g00787 510 MobiDBLite consensus disorder prediction 476 510 - -
Bach8g00787 510 Pfam RING-variant domain 265 312 IPR011016 GO:0008270
Bach8g00787 510 MobiDBLite consensus disorder prediction 1 49 - -
Bach8g00787 510 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 320 IPR013083 -
Bach8g00787 510 SMART ringv_2 264 313 IPR011016 GO:0008270
Bach8g00787 510 CDD RING_CH-C4HC3_MARCH 265 313 - -
Bach8g00787 510 PANTHER OS02G0165000 PROTEIN 24 480 - -
Bach8g00787 510 MobiDBLite consensus disorder prediction 233 255 - -
Bach8g00787 510 MobiDBLite consensus disorder prediction 1 18 - -
Bach8g00787 510 MobiDBLite consensus disorder prediction 233 248 - -
Bach8g00787 510 SUPERFAMILY RING/U-box 261 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00787 Bach-Chr8 5171759 5176466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00787 253 377 C3H Transcription Factor Family AT2G37950 34.559 1.35e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00787 - - rcu:8284538 633.639