Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00783 ATGCAAATGATGCCTGGTGACCCCTTTTCCCTATCTACTTCCATCGGTGGGTTTGCTCAGCCTCAGAGTCAAGAACAAAACACAAACCCTAACCCTAAACCTAATCCACCTCCTGCAAAGAAGAAGAGAAACCTACCAGGAACACCAGATCCAGATGCCGAGGTCATTGCTCTTTCGCCGAAAACTCTCATGGCTACCAACCGATTCATTTGTGAAATATGCAACAAAGGATTTCAGAGAGATCAGAATCTTCAACTTCACCGAAGGGGACACAACCTTCCATGGAAGCTACGGCAAAGGTCCAACAAAGAGGTCATTAGAAAGAAGGTTTACATCTGCCCGGAGAAGACTTGCGTCCACCATGACCCGGCAAGAGCACTAGGCGACCTCACCGGGATAAAGAAGCATTTCAGCCGCAAACATGGTGAGAAGAAGTGGAAGTGTGACAAGTGTTCCAAGAAATACGCTGTCCAATCTGACTGGAAAGCTCACACCAAAACATGTGGAACTAGGGAATATAAGTGTGACTGTGGCACCCTCTTCTCCAGGAAGGACAGCTTCATTACGCACAGAGCTTTCTGCGATGCTTTAGCTGAAGAGAGTGCGAGGCTCACCTCAGTTGCATCCACGAACCTGAATTTCAAGAACGAAGAGAGTGTTCTCAATTCACAGCCTAGTTTGGCGCATGAATTTGCCGGCCAGGGACACCAAAACACGGCTGGTATACCACAATTTGGTTTTAGTGGAATGGGAATGGGTGGAGAGCACCAAAGGTCAAGCTTGTCACTATGGTTGAACCAGGGAAATCCCCAGATGAATCCTCTCGATGTGGGAGCTAACTCAGGTCTTTACGTGTCATCGAGTTCTTCTGGTTTGCCTGAGATTGTTCAAATGGCCCCAGCCAATTCCTTTGCCTCTTCTTCATTGTCTAATTTTGGAATACCTCCTTCGAATTCAGCAAACGCAAACTTTTCTCTATCTTCACTTTCTAAAGGAGAAGCATGTGGAACTGGAAACCTCACCTCTATGTATTCTGAGGGTCAAAACAATCAATCAAAGCCACGTTCCCCCATGTCAGCTACTGCGCTTCTTCAAAAGGCAGCTCAGATGGGTTCTACTAGAAGCAGCAGCAATCCCTCCATGTTCAGCGGTACTTTTGGAGTAATGTCCTCCACCTCAACTCAAGTGATCAGTACTAATGTCAACCAAGACAGAGCCTTTCAAAATCAAGGTATGAAGCAGCCAGAGAGTTTTGCTTCAAGTAGCAGTACTGCAGGTGCAGCCATGGTTGGAAATAGTAACTTTAGTTCATTGACGCATACATCGAACAGTCTTGAGCAACTCTTGATGCAAAGCAATGGGAAACAAGGTGACCAAGGGCAATTGAAGCTCCGCCATGGTTCAAAGGTTGTGGAAGATCATGCTTTAACAAGAGATTTTCTTGGAATGGGAGGAGGGCGAGGAGGTGGGGCCGCATTCCTACCCCAAGAGCTAGCTAAGTTCGCTTCCATAGGTTCCCCAATGGGTCTGAGCCAATTCACTGCCAATCAATGA 1554 0.4691 MQMMPGDPFSLSTSIGGFAQPQSQEQNTNPNPKPNPPPAKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVIRKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARLTSVASTNLNFKNEESVLNSQPSLAHEFAGQGHQNTAGIPQFGFSGMGMGGEHQRSSLSLWLNQGNPQMNPLDVGANSGLYVSSSSSGLPEIVQMAPANSFASSSLSNFGIPPSNSANANFSLSSLSKGEACGTGNLTSMYSEGQNNQSKPRSPMSATALLQKAAQMGSTRSSSNPSMFSGTFGVMSSTSTQVISTNVNQDRAFQNQGMKQPESFASSSSTAGAAMVGNSNFSSLTHTSNSLEQLLMQSNGKQGDQGQLKLRHGSKVVEDHALTRDFLGMGGGRGGGAAFLPQELAKFASIGSPMGLSQFTANQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00783 517 SMART c2h2final6 111 141 IPR013087 -
Bach8g00783 517 SMART c2h2final6 69 91 IPR013087 -
Bach8g00783 517 SMART c2h2final6 146 166 IPR013087 -
Bach8g00783 517 MobiDBLite consensus disorder prediction 1 29 - -
Bach8g00783 517 FunFam protein indeterminate-domain 12-like 48 117 - -
Bach8g00783 517 Pfam Zinc-finger double-stranded RNA-binding 69 91 IPR022755 -
Bach8g00783 517 MobiDBLite consensus disorder prediction 30 44 - -
Bach8g00783 517 MobiDBLite consensus disorder prediction 1 53 - -
Bach8g00783 517 FunFam protein indeterminate-domain 5, chloroplastic-like 124 203 - -
Bach8g00783 517 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 91 IPR013087 -
Bach8g00783 517 MobiDBLite consensus disorder prediction 340 363 - -
Bach8g00783 517 SUPERFAMILY beta-beta-alpha zinc fingers 68 166 IPR036236 -
Bach8g00783 517 Gene3D Classic Zinc Finger 125 203 - -
Bach8g00783 517 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 23 491 IPR031140 -
Bach8g00783 517 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Bach8g00783 517 Gene3D Classic Zinc Finger 47 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00783 Bach-Chr8 5150628 5152503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00783 1 505 IDZ Gene Family AT5G03150 49.551 3.77e-146 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach8g00783 zf-C2H2_jaz 7.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00783 K25870 - gmx:100789331 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00783 8 5150628 5152503 Bach1g02539 1 36609521 36611414 BWGD
Bach8g00783 8 5150628 5152503 Bach8g00783 8 5150628 5152503 ECH