Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00780 ATGATGCAAGGATTCATGGCTGGGTTTGCCATAGTACTGGCTAATGCTTTATTTGCATGTGATTCTATGGATGAGTTGACATTGAAGCTGTTTAATGGCCAATACTTTCTTATAATCTTCACTCAAGGTCCCAAGTGTTGGTTAAATGAAAAGAAACAACAGAGAGTTATGGGGCATAGACATATATATAGCACATCTCAAATGTTTGATAGTGAGCATGACCAGAATTGGAGTCATATGCCCACTGATCAACATTATGTTCACCTAGGTAGAACAAACACATCGGAGAATGGTTCTTGCATTTATCCGGTGAAGAGTATGTCTATGGATGGTATTTCTTTTACACCTCCGTGGAACTCATCTACAGCATCAAATGGATATCCATCCTCAAGTCTTAACATTGAAGTACCTCCTCATCAATCAGATGCATTTGTTACTTCTCATGAACATTTTCTGCATTCATCAAATGCTGGAGCCTTTTACGCTAATTCTGAAAACTATACACACCAGCCTTCTTCTTCCAATTACGACAGACAGCCATTTCACGTTGTTGATGGTAGTTTTAATGACCTGACAATGGGAAGTGGAAGAGGGCCTCACAAGCGAAAGAGCCCTGGAATTCCTTCAGTCTCTGAGAGAGGCAGTACAAGCAGATACTTTAATGCTGGAAGTTCTAATGATCTTCCCATATCTTCAGAATTGCGACAGGAAAAGCCAAGTATAGATTCTCAATATATGCCTTGGGATCATGTTACTATGACACCCACCTTCAGAGGCAATGGCATTTCAATCAGGGGAGAGGGTTCTGTAAGGAATGTCAGAAGCCGATCTGCAGTTGATTTGGAATCCAACTTGGCTAGGACCCATTTATCCAGCAATCATTCACACAATTCCCACCCTACTGGTCCACCCATTGATCTACCTAGAGCTGTGGATCTCTCAGGTCCAAGTTCTAGCACTTCGACGCGGGATTGGAGCCAAATGAACATATCTCCTGCTCATGGGAGGGTGCTATTACCAGAAACAAGTGGTTTCGGCCATGAGACTGGCCACTTCATTGTTGGAAATGGTGCTAATAATGCTTCCGTTGATATCGGAGGTTATCATCAGGAGTTTGGTACAAGCAGAAGTTCTACTGTTCCTCAAAGTTTTCATGGTAATGTAACTCAGTCTGCTAGGGGAGTTCGCAGTAACAATTCCCAAAGATCTACCCCAACTTTTAGGGCTTCTTCAAGCTTGCGCTTGGGACCTGTGGCACCTTCAGATGATGGATTGCGTATTGTAGCTGAAAGTTACTCCTCTAGACATCCAAGGCCATCGGCCAGCATCGGTTGGCGTAACAGTGAGAGGAACGGAAGGATATATAACGGTAGATATCGATTTGCTGATGACGTTGGTTTACATGAACGGTTTTCATCTGAGGGTTTCATGAGTGTCGATCGCACATCATTTTATGGTTCTAGAAATATGTTCGATCAGCATAGGGACATGAGGATGGACGTAGACAATATGAGCTATGAGGAACTACTTGCACTTGGAGAGAGGATTGGCCATGTCAGCACAGGATTGTCTGAAGACTTGATTTCGAAGTGTCTTACTGAAACAATATATTGTTCATCCGATCAAAATCAGGAGGAAGGAACGTGTGTAATCTGCCTGGAAGAGTACAAGAACATGGATGATGTTGGGACTCTGAAAACTTGTGGCCACGACTACCACGTGAGCTGCATTAGGAAATGGTTATCTATGAAGAACCTATGCCCTATCTGCAAGTCTCCGGCTTTGGCTGACAATAAGTAACTTATTCATTGTGGATGTAGTTCGCCAATTCTCATTTTGTATATATAATTTGGATTATTCCTCAAAGTGGGGGAAACAAACTTCCTGTTGTGATGTGTAATAGGGATGCTACTCAATTCCAATGCATTTCTTTATGGCTTCAATCTCAATCACGTGAGGCCTTGGAATCATTATTATTATTTGTTAATGTTATC 1994 0.4218 MMQGFMAGFAIVLANALFACDSMDELTLKLFNGQYFLIIFTQGPKCWLNEKKQQRVMGHRHIYSTSQMFDSEHDQNWSHMPTDQHYVHLGRTNTSENGSCIYPVKSMSMDGISFTPPWNSSTASNGYPSSSLNIEVPPHQSDAFVTSHEHFLHSSNAGAFYANSENYTHQPSSSNYDRQPFHVVDGSFNDLTMGSGRGPHKRKSPGIPSVSERGSTSRYFNAGSSNDLPISSELRQEKPSIDSQYMPWDHVTMTPTFRGNGISIRGEGSVRNVRSRSAVDLESNLARTHLSSNHSHNSHPTGPPIDLPRAVDLSGPSSSTSTRDWSQMNISPAHGRVLLPETSGFGHETGHFIVGNGANNASVDIGGYHQEFGTSRSSTVPQSFHGNVTQSARGVRSNNSQRSTPTFRASSSLRLGPVAPSDDGLRIVAESYSSRHPRPSASIGWRNSERNGRIYNGRYRFADDVGLHERFSSEGFMSVDRTSFYGSRNMFDQHRDMRMDVDNMSYEELLALGERIGHVSTGLSEDLISKCLTETIYCSSDQNQEEGTCVICLEEYKNMDDVGTLKTCGHDYHVSCIRKWLSMKNLCPICKSPALADNK 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00780 599 ProSiteProfiles Zinc finger RING-type profile. 549 591 IPR001841 -
Bach8g00780 599 MobiDBLite consensus disorder prediction 191 215 - -
Bach8g00780 599 MobiDBLite consensus disorder prediction 289 327 - -
Bach8g00780 599 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 514 595 IPR013083 -
Bach8g00780 599 SMART ring_2 549 590 IPR001841 -
Bach8g00780 599 MobiDBLite consensus disorder prediction 389 411 - -
Bach8g00780 599 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 514 595 - -
Bach8g00780 599 MobiDBLite consensus disorder prediction 313 327 - -
Bach8g00780 599 MobiDBLite consensus disorder prediction 389 415 - -
Bach8g00780 599 SUPERFAMILY RING/U-box 539 594 - -
Bach8g00780 599 Pfam Ring finger domain 548 591 IPR001841 -
Bach8g00780 599 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 153 595 IPR045191 GO:0061630
Bach8g00780 599 CDD RING-H2_RNF24-like 547 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00780 Bach-Chr8 5126186 5132459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00780 57 597 C3H Transcription Factor Family AT2G37150 43.268 3.76e-114 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00780 - - gmx:100803627 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00780 8 5126186 5132459 Bach8g00780 8 5126186 5132459 ECH