Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00742 ATGGAAGAAACAGAAACTATTATGGCTGCACTCTCAACCCTCACTCCTTCCCAAGTCTCAGATCTTACCCGTTCCATCCTCTCCGCCACCCAGTGCCACCAATGCCGCCTCTCCTCCCTTCTCTCCTCCCCAACCCTCTTTTCTTTGACCCTTCATTATCTCCACTCACTCTCTCTGCCACAAAAGACCCTCCTTATTGCTCGCCACCTTGTATCATCTCTTCACCTCCTCACCTGCCACTTCCAATCCAACAACGCCGCATCAGCGCCACCCTTGTCCACCGCCGCCATCAGACAGCGTGAACTCGACGCCGTTTTGCTACTCCTCTTACTCTGCGAAACCCACCAACACAACCCAGAAATTATTGAAGCACCCTTTTCCGCTTGGCGCGTGAACTTAAGTGATCTCTTTTCTGATACATTGTTGACGGTCTCTTCTTCTAGCAATGGGGCATGTACTGCCACCACCTTGATTCCTTACATTGAGATGGTGGCGCGGTGCTATAGATTCACCACTTCAATGGGATGTGGGGGGAGCAGTGGAGGAAAGGAACCGAGGGAAGTGGCAGCTGCCGCGACGGCAGTTGTGGCGCTGCCGGCGGTGGAGGTGAAAGTCGGCGGAACAGAGTGTGTGATATGTAGAGAGGAGATGCAAATAGGGAGGGCTGTCTGTGAGTTGCCATGTCAGCACTTGTTTCATTGGACATGCATCTTACCGTGGCTGAGCAAGAGGAACACGTGTCCCTGCTGCAGGTTTCAGTTACCGTCCGATGATATGTTCGAAGAGATCCAACGGCTCTGGGAGGTCCTGGTTAAAATGGCAGAGAGCCGTGCGATTGATGTGGAAGGTGAATGA 855 0.5275 MEETETIMAALSTLTPSQVSDLTRSILSATQCHQCRLSSLLSSPTLFSLTLHYLHSLSLPQKTLLIARHLVSSLHLLTCHFQSNNAASAPPLSTAAIRQRELDAVLLLLLLCETHQHNPEIIEAPFSAWRVNLSDLFSDTLLTVSSSSNGACTATTLIPYIEMVARCYRFTTSMGCGGSSGGKEPREVAAAATAVVALPAVEVKVGGTECVICREEMQIGRAVCELPCQHLFHWTCILPWLSKRNTCPCCRFQLPSDDMFEEIQRLWEVLVKMAESRAIDVEGE 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00742 284 CDD RING-H2_PA-TM-RING 209 251 - -
Bach8g00742 284 SMART ring_2 210 250 IPR001841 -
Bach8g00742 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 182 257 IPR013083 -
Bach8g00742 284 Pfam Ring finger domain 209 251 IPR001841 -
Bach8g00742 284 ProSiteProfiles Zinc finger RING-type profile. 210 251 IPR001841 -
Bach8g00742 284 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 88 255 - -
Bach8g00742 284 SUPERFAMILY RING/U-box 206 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00742 Bach-Chr8 4907057 4907911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00742 2 275 C3H Transcription Factor Family AT5G02750 49.823 1.36e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00742 K11982 - gmx:100818800 333.183