Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00727 GCGGCGATGAGTGGCTAAGGTGGAAAATCTGGGTTCAGTTTCAGTTGTCAATTTCCAAATTGAAACAGAAGAAAGAGCTGAAAACGCATAGGTAGCCTTAAATGGGAAACGCACACGGCCATCGCAAACACCATAAACCCCTTCCTCAAAACTCTGGTCCTATATATGCTCCCCTTGCTCGCCCAAAAATCCCAAGCTCAGCTTATACAAGTACAACCCAGAGTCAGAGTAGCTCCAAAATGTTGTCTTTGCCATACGCTCACGTCGACTCCAGCCTACGAGCGCTCTCCGGCCAGGCTGAAGGGTTTGGCCGCTTTGCGATCGGTGGGCTTCACGGTCCCCTTCATAAAGTCACAACTTTAGCAGATGATGGGCCAGGATCACTACGTGAAGCATGTCGTAGGAAAGAACCACTATGGATTGTCTTTGAAGTATCAGGCACTATTCATCTCTCATCTTACTTGAGTGTGTCATCTTACAAAACCATTGATGGGCGTGGCCAAAGGATTAAACTCACTGGAAAGGGTTTGCGGCTCAAGGAATGTGAACATGTAATAATATGCAATTTAGAGTTCGAAGGTGGTCGTGGACATGACGTTGATGGCATTCAGATCAAACCTAATTCAAAGCACATATGGATAGATCGATGCAGTCTTCGTGATTTTGATGATGGACTTATAGATATCACCCGAGAAAGTAAAGATATTACTATTTCTAGATGTCACTTTGCTCAGCATGACAAAACAATGCTCATTGGGGCAGATCCCTCCCATACTGGTGATAGATGCATCAGAGTAACTATTCACCATTGTTTTTTTGATGGGACTCGACAACGTCATCCTCGTGTTAGATATGCAAAAGTACATCTGTACAATAATTACACCAGAAACTGGGGCATATATGCTGTATGTGCTGGTGTGGAAGCACAGATATACTCGCAATGTAATATCTATGAAGCAGGGCAGAAGAAGGCGGCGTTTAAGTATCTTCCTGAAAAGGCAGCAGACAAGGAGCTAACAGCAGCTGGTCACATAAGGTCTGAAGGAGACTTATTTATCAGTGGAACTCAACATGGTTTAATGACTGACAGTGTTGGATGTGGCACTTTCCATCCTAGTCAATATTACCCCACATGGACAGTGGAACCTCCTACGCATGATCTAAAACAGATTCTCCAGCACTACACTGGATGGCAATCTGTTGCGCGCCCCGCAGACCAACCAATGGTTGCATAGTGGCACAAAGCAACTGCTCACACTGATAAATCAACTCTTCACTCTCCTGCCTCTGGGGCCTGTTTCAATAAGTTATTTTCATGTGTATACAAATGAGAAGATGCTTTCTTCCTAGCTCTATAATGTCTAGTTGCCCTTATCTGTGAAGAATAATCTGAATACATGTCAATTTGCATGTTAATGAATGTCAACTTTTTGCTGGCTGAGCTGTGAGCTGAGCTCACG 1460 0.4418 MGNAHGHRKHHKPLPQNSGPIYAPLARPKIPSSAYTSTTQSQSSSKMLSLPYAHVDSSLRALSGQAEGFGRFAIGGLHGPLHKVTTLADDGPGSLREACRRKEPLWIVFEVSGTIHLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDFDDGLIDITRESKDITISRCHFAQHDKTMLIGADPSHTGDRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCAGVEAQIYSQCNIYEAGQKKAAFKYLPEKAADKELTAAGHIRSEGDLFISGTQHGLMTDSVGCGTFHPSQYYPTWTVEPPTHDLKQILQHYTGWQSVARPADQPMVA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00727 377 Gene3D - 52 360 IPR012334 -
Bach8g00727 377 SMART amb_all 92 290 IPR002022 -
Bach8g00727 377 SUPERFAMILY Pectin lyase-like 64 371 IPR011050 -
Bach8g00727 377 Pfam Pectate lyase 121 283 IPR002022 -
Bach8g00727 377 PANTHER PECTATE LYASE 18-RELATED 54 323 IPR045032 GO:0030570
Bach8g00727 377 MobiDBLite consensus disorder prediction 1 25 - -
Bach8g00727 377 PRINTS Pollen allergen Amb family signature 65 82 IPR018082 -
Bach8g00727 377 PRINTS Pollen allergen Amb family signature 267 286 IPR018082 -
Bach8g00727 377 PRINTS Pollen allergen Amb family signature 120 136 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00727 Bach-Chr8 4821671 4824756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00727 87 372 Polysaccharide Lyase AT3G55140 78.322 6.97e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00727 K01728 - qsa:O6P43_010375 619.387