Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach8g00712 | ATGAAGAGACAGAGAGACGATGAAGCAATGACAGAAAGCTTAGACGTAGCGAACTGTCTAATGCTGCTGTCTCAAGCACCAGAAAGCAAGCCCCAGATCACAAGCTTAGCAGCAGAACTACAAGTATTCGAGTGCAAGAGCTGCAACCGCAAGTTCTCATCATTTCAAGCTCTTGGTGGCCATAGAGCTAGTCACAACAAGAGACCCAAACTAGAAGAGAACGAACTAAAAGTGCAGCCAAAACCTCTCAACTTGGGGAACAAACACAAAATCTATCACTGCTCAATTTGTGGCCTTGGATTCTCTCAGGGCCAAGCACTTGGAGGCCACATGAGGAAACACAGAGTTGCCATCAAAGAAGATTTTCAACCTATAAACCAATTGGTTGCAGAAATCCGAGTTCTAAAAAGCTCCAGCGCTCGCTTAGACTTGAACTTGACACCTCTGGAGAATGAGTTCAAGTTATTGTTTGCAAAGATAGCACCTAATGTTCATCTTTCTTTGTTGTGA | 510 | 0.4392 | MKRQRDDEAMTESLDVANCLMLLSQAPESKPQITSLAAELQVFECKSCNRKFSSFQALGGHRASHNKRPKLEENELKVQPKPLNLGNKHKIYHCSICGLGFSQGQALGGHMRKHRVAIKEDFQPINQLVAEIRVLKSSSARLDLNLTPLENEFKLLFAKIAPNVHLSLL | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach8g00712 | 169 | Gene3D | Classic Zinc Finger | 40 | 63 | - | - | |
Bach8g00712 | 169 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 2 | 151 | - | - | |
Bach8g00712 | 169 | Pfam | C2H2-type zinc finger | 92 | 115 | - | - | |
Bach8g00712 | 169 | Pfam | C2H2-type zinc finger | 42 | 67 | - | - | |
Bach8g00712 | 169 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 92 | 114 | IPR013087 | - | |
Bach8g00712 | 169 | SMART | c2h2final6 | 43 | 65 | IPR013087 | - | |
Bach8g00712 | 169 | SMART | c2h2final6 | 92 | 114 | IPR013087 | - | |
Bach8g00712 | 169 | SUPERFAMILY | beta-beta-alpha zinc fingers | 42 | 114 | IPR036236 | - | |
Bach8g00712 | 169 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 94 | 114 | IPR013087 | - | |
Bach8g00712 | 169 | Gene3D | Classic Zinc Finger | 73 | 141 | - | - | |
Bach8g00712 | 169 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 45 | 65 | IPR013087 | - | |
Bach8g00712 | 169 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 43 | 70 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach8g00712 | Bach-Chr8 | 4750934 | 4751443 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach8g00712 | 1 | 169 | C2H2 Transcription Factor Family | AT2G37430 | 43.956 | 1.31e-38 | 128 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bach8g00712 | zf-C2H2_6 | 1.4e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach8g00712 | - | - | gmx:100806997 | 185.267 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach8g00712 | 8 | 4750934 | 4751443 | Bach1g02614 | 1 | 37097557 | 37098078 | BWGD |