Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00704 CAATCTCCAAGGGCCGTCGTCAACAGCTTTGGTCGGAGACTTGGAGCTCAATAGTTTCATTTAAGTAGAAATGGCTTTTATCTCTGGAATTCGGCGCTTTCTTCGCGATTCATCTGCTACTTCGTCAATTCTTCATTCCCAATTTAATTCAATTCGTCTCAGTTCAACTCTCACATCGCCGAAGCTTTTCATCAGCGGTGAGCTTTAGATTCACAACTACGTGCTTTGGATTAATACGCGTTTCTTTGTTTCTTTCTGCTATCATCTTAAGGATCTTGCCTCCTAGTACTTCTTAGAACTGTAACTGGATCCTTAAATATTTGTAAGTATATTAGACGCGATTATTCATGACCTTTGCTGTGGAGACTCGTTGTATCCTTCCTTGATAAAGGCATACAACATACTTTATTTTCGTTGTTTTCCCTTTGATAGGGGTCAGTGTTGGTGTGTTATAAAGCGCAGTAAGTTGCTGTATGCTTTTTTTCTTGGTCTGTTGCGGGAAATCGGTTAAGTGTGTGTGTTTTCCTGAGCTGGGTTTGAAGTTTGCAATAATTGCATGTTCAGTCATCTTATGGGAATCATAGCTTCTATTTACTTGATTCCTTAAAAAATGACGGGTTTTGTTCAACGTCACTTGCTGTTACCATTTGTTGCTATATAACCTTGCAACTTCGACTGACCTTTTTCTGATATATATGTACCGCTGTTGTAGTAATTTAAAACCCATGGAAAATTTTCTCGTCTGATTCATTCTGTGAGAGGGCGAAAATCCAAGAAAGAAAAAAATGAGGCATAGAAATCATAGGAATTTCTTTTAGATCACATCTGGCTTTCTGTTCTGATTGTTTCAAGTATGCCTAACATAGATGGTTGTACTAAAAATTTGTGTTAATAGCAATAACCGTCATAAAATGTGATAAGGTAACTGTCCACTGGGATTTCTTTGAATGCTACAGTAGCTTTCTATAGCCAAGAATCTCTTCATCGAAGTTACTGAAGCATTTTGGTGAAGTTTAAGTTTTAATTTTGTATGGTGGCATCTTATGTCATGTAGGCTATTTTTATAATCATAACAATTAATAGTTGCTGTACTGATTAATGGCTATTCCCTTGAGTTGAATTCCTTTGGGATAGATTACCCCTTATTGTGTTCCATTTGGCATGCACTTCAATAAAGCAGTATTCTTCCCACGCCTTAGGGAGAGGATAATCTGCACAATATGCTAGGTCTGTCACGGCAGACAACGGATGAAAAACTTAAGGAAACATTTTCTCCTTTTGGGCAGCTGGTTGAAGCTAAGGTCATAACTGATAGAGTCACTGGAAGATCAAAGGGATTTGCTTTTATAACATACGCAACCATAGAAGAAGCTGAAAAGGCCAAAGAGGGAATGAATGCCAAGTTTTTGGATGGATGGGTTATTTTTGTGGATCCTGCCAAACCGAGAGAACCGAGAGCTCCTCCGCAAGCACAGCCTCAGTCTTCTGGAACGGGTTTCACAGTTAACAAGACAATTGGATGGTCTGGTTGATTGTCCGAAGAAAACTTGGATTGGTCACAATGTTAGGATGGTTAATTTGAAGACTACCATACATTCTTTTGGTCAATTCAAAGACTGTTCTTTAATTCAATTATGTTACAATTGCTGGAAAATGTCGATCAGTCTGAAATCTTAAAATACTTTTTGGATTTCAGCTATTATATTACAATTGCTTAAGAAAATTTTGATTCCGAAGACACAGTGAATAGTGTTTCAAACACACTCC 1767 0.3786 MAFISGIRRFLRDSSATSSILHSQFNSIRLSSTLTSPKLFISGLSRQTTDEKLKETFSPFGQLVEAKVITDRVTGRSKGFAFITYATIEEAEKAKEGMNAKFLDGWVIFVDPAKPREPRAPPQAQPQSSGTGFTVNKTIGWSG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00704 143 SMART rrm1_1 38 111 IPR000504 GO:0003723
Bach8g00704 143 FunFam RNA binding protein 24 137 - -
Bach8g00704 143 Gene3D - 13 125 IPR012677 -
Bach8g00704 143 MobiDBLite consensus disorder prediction 123 143 - -
Bach8g00704 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Bach8g00704 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
Bach8g00704 143 MobiDBLite consensus disorder prediction 114 143 - -
Bach8g00704 143 SUPERFAMILY RNA-binding domain, RBD 36 137 IPR035979 GO:0003676
Bach8g00704 143 PANTHER NUCLEOLAR PROTEIN 8 19 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00704 Bach-Chr8 4698794 4700845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00704 36 142 Eukaryotic Initiation Factors Gene Family AT3G16380 28.037 3.41e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00704 - - qsa:O6P43_006775 202.986