Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00696 ATGGCGACAAATTCAAGCCTGGACATGGCTCTGGACGATATCATCAAGTCGAATAAGCACAAAACTCGAGGAAGCAATTCCAGGGGCAGAGCATCGCGCAATTCAGGGCCAACTCGCCGGATCCCCAATCGCTTTACCAACCAAACCGCACCGTACGCCAAGCCCTTTCACGGGGCTGATGCGACCTGGCAGCATGACATGTTTATGGAGGATCCCGCTGCCTTTCCGCCACGCGCTGCTCGATTCTCTTCTAGTTCCACCGAGGCAGGCATCAAGGTCTTGATCTCTAATCTCGATTATGGGGTCTCCGATGAAGACATCAAGGAGCTCTTTTCTGAGGTTGGTGACATGAAACGATATTCCGTAAATTATGATAGAAGTGGAAGATCAAAGGGAACTGCTGAAGTTGTCTATTCTCGACGAGTGGATGCTCTTCAAGCTGTCAAGAAGTATAACAATGTTGAATTAGATGGGAAGCCAATGAAAATCGAGATTGTTGGGCCAAGAAATATTCCTTTTCAAACTCCTGCTCGTGGTCCAGTTACAAATGTCATGTATGAAAGCATTGTTCGAAGTGGCCGAGGAAGGACTGGCGCTGCAGGACAACCCCGCGGCAGTGGCCGTGGCAGGAGGGGGCGTGGAGGGAATAGAAACCATGCTGAGACGGTTTCTGTTGAAAATCTTGATGCTGATTTGGACAAATACCATGCAGAAGCCATGGAAACTAATTGATGAGATCATGGCCCTTTTTTGTTGGACTAATGGACTGATAAATCAACCGCAGTCTCATGAAGCGGCATACCGAAAGTACACATATGTGAGTGTGTGCAACTGTTTTTTTTGGAACCCAAGAATACCTGGATGGTTCAATTCATGGATAGGTACTTGGTCTCTCAATCTGTAGTTTTTAGTTCAAATGAACTGCATCTCACAATAGATGTATGTACTATGTTTATGTTTATGTTTACTAATCTTAAACAAGTGTATGGCTCCCTATGATAAGGATGCTTTCCGTAGTTGGTTCTGGGTCGGTCTCTCACTTGCAAGCTTCTCTGATTTGGACTTCAGTTGTGAAGTGGGTTTTTTCTTTAATTTCG 1097 0.4567 MATNSSLDMALDDIIKSNKHKTRGSNSRGRASRNSGPTRRIPNRFTNQTAPYAKPFHGADATWQHDMFMEDPAAFPPRAARFSSSSTEAGIKVLISNLDYGVSDEDIKELFSEVGDMKRYSVNYDRSGRSKGTAEVVYSRRVDALQAVKKYNNVELDGKPMKIEIVGPRNIPFQTPARGPVTNVMYESIVRSGRGRTGAAGQPRGSGRGRRGRGGNRNHAETVSVENLDADLDKYHAEAMETN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00696 243 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 168 IPR000504 GO:0003723
Bach8g00696 243 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 161 IPR000504 GO:0003723
Bach8g00696 243 CDD RRM_THOC4 92 165 - -
Bach8g00696 243 Pfam C-terminal duplication domain of Friend of PRMT1 191 237 IPR025715 -
Bach8g00696 243 SMART FoP_duplication_2 169 243 IPR025715 -
Bach8g00696 243 SUPERFAMILY RNA-binding domain, RBD 81 176 IPR035979 GO:0003676
Bach8g00696 243 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 7 241 - -
Bach8g00696 243 MobiDBLite consensus disorder prediction 1 53 - -
Bach8g00696 243 Gene3D - 78 231 IPR012677 -
Bach8g00696 243 MobiDBLite consensus disorder prediction 192 243 - -
Bach8g00696 243 MobiDBLite consensus disorder prediction 224 243 - -
Bach8g00696 243 MobiDBLite consensus disorder prediction 28 50 - -
Bach8g00696 243 SMART rrm1_1 92 164 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00696 Bach-Chr8 4652468 4655056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00696 90 165 Eukaryotic Initiation Factors Gene Family AT2G23350 34.211 1.51e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00696 K12881 - qsa:O6P43_006786 241.506