Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00688 ATGGTGCGCATGACCATATCTGGCTTCAAAAGATCAGGGCATTTTGCAGAAAAGAGATTGCCCCAAAGAAAACGCCCATCAGAAGAAAAAAGCAGGGAAATTGCACTGGTGGTGGATGAAGCAAACACCAGCAGAGCAATTGCTCAGGGGATCCTCAACTCCCTTGGCATAGATGCATATGGTGTGCCCACTTCTGAAGCTGCTCTGGAGCTTCTGATTATGAGAATCAACTACTACAACTTCATTCTGGTTGACTTTCATATGACAACTATCCCTGGTCCAGAGACCGTGAGACGGATGAGGTTGCTAGGGGTTACTACTAAGATTTTGGGGGTGTGCCCCAGTAACAGTGAAGAAAGTAGAAGAGCATTTCTGGCAGCAGGTGCTGATGCCTGCATTGAGAAGCCCCTGAATCCAGAGAGTCTCGGGAATATTGGGAGTGCTACTGCCAGCGAAGCTGAAGTTGATGTCAAAAAGGACAGAGTCACTGATGCTCTAAATGCCCGCCGAGGCTACAGTATAGAAGGGAATTATAACAGAAGAAAAGGCCAGCAACAAGAGCTGGCATGGACTATTAGAATCATCACCAGCGTCATCGTTTTTGTCCAGCAATTCTGCCAAACTGAGAATCAAGAGATCAAAACGACCCACGGACCATGCTGCTTTAGTTACACGCTGCTGCAACTGATTCCGCTCAACAAAGAAAATATGAATAATCACTGTGTTCCAGATTTCGAAATTGAAATGGATGATGATGAGTACCCAATATACACCTCTTCTGGGCTAACTCGCCTCAAGAAATCTTCCATGCCAGATGAAGATATCATGGAGTTATTATGGCAAAACGGCCAGGTGGTGTTGCAGAGTCAGAACCAACGATCTCTCAAGAAACCACCACCGGTGGGGGCCTCTACGGCGAGAGAGATTCGATCCTCACAACAAGAAGCAGAAAATTACAACCAAAATCTCTTTATGCAAGAAGATGAAATGACTTCCTGGCTTCACTATCCCATCGTTGATGAGAATCCCTTGGATCAAAATTTTTGCGCCGACCTACTCTACCCGCCTCCCACCATTGTTAACAACAACAACAACAACAGTACCATGCAGACCCCTGCCGGTACATCTCAGACATCGGAGCTCCAGCAGCCGCCGAGGTCGGTGGCTCCGCGTCCGCCGATAGCGCCTACGAGGAGAACTGAGCAGGTGCAGACGAGGATTCAGAACTTCGCTCACTTCTCGAAGCACAATGTGAGAGTTCAGTCAGGGCCGTCAAATTCGAAGGCTGTGGTGGGGGAATCAACGGTGGTAGATTCAAGCATCACGCCGAATGTGGCGACCGCTTCCACGGCTTCGGAGACCGTAAGAAGCACGACCGAGCCAACGGACAGAGGTGGCGGCAGCGCTAGCATGAGCAGTGCTGCAATAGCGGCACCTTCCACCGGCAGATGTATAAGAGGGAAGGAAGTGATGACGTGCGACATGACAGTAACGTCATCTCCGGAAGATTCGAGTGGCAGCGGTGAAGCGGCTCATCGAAAAGCGGCGAAGGATTGGAAGCGGAAGGGTCGGGAACTCGACGATTCCGAATGCCAAAGCGAGGATGTTGATTTTGAATCTCCGGATGCAAAAAAAAAAGTTCGCGGATCAACATCTACGAAGAGATCTCGTGCTGCAGAAGTTCATAATCTCTCAGAGAGGAAGCGTCGAGATAGGATAAATGAAAAGATGAAAGCTTTGCAAGAACTTATACCTGGGTGCAATAAGGTGAACAGGCTTGCTGACAAAGCTTCAATGCTGGATGAAGCAATTGAGTACTTGAAGTCTCTGCAATTACAAGTACAGATGATGTCGATGGGATATGGCATGGTCCCCATGATGTATCCAGGAATTCAGCAGTATATGCCACCAATGGGAATGGGGATAGGGATGGGTATGGGCATGAACAGGCCAGTAATGCCAATTTCCGGTATGTTAGCAGGTTCTGCTTTGCCTGCGGCAACTGCAGCTACTCATTTGGGACCAAGGTTTCCTATGCCTCCTTTCGCCATGCCTCATGTTCCTGCACCTGACTCATCCAGAATGCAAGCAGCACAGCAGTCAGATCATGTGATTACATCACTTGGGGCACCTGATCCAAATCAGTCACGGATCCCAAACTTCACTGATCCTTATCAGCAATACCTTGGTCCCCACCAGATGCATTTACAACTAAACCAGAGTCAGGCAATAAACCAAGCAAATGTCAGCAAGCCAAGTAGCAGTAGGGGACCGGACAATCCAGAAAATCATCAATCAGAAGGAATATGATTCATCGACCATTGCAATCTTGGGCTGTCAAAAGATTCAAATGATGTTACTCGTTGTTTTTGCAGATTAGGTATTATGACTTCTCTTTGACATCTGCCAAGTTTTGTAGCGTATTGTATGAGAACGAACTTCTTGGCAGTTCTCGGTAGCAAGCTGATCTATACACGGCTAACATGTAAATTATCGCCACCCTCGAATTCGTCCTCCCCTCCCCTTTTCTGCTAAAATTTTTTATCCTGTTCGTGTGTATGTTCTTTGACGTGGGAAGGGGTAGCAGATAGATGGCACCAATACAAATGAATAACCCGTTTTAGCAAAGCTCTTTCTTGCAGTTTGGTTCTCTTAGATTTGGTTCAGATTCATGTTCTCTGGACAATACTATATCCTCTTGGCTTTTATCTTGATTATTTACAAGATATAGAAGCATTGGATGATTTACGTAACTTGGTCAGCAAGGTTCTAAGAATGTCTAGGTCAACTAAAGTAATAAAATTGTCAATTAAAG 2815 0.4657 MVRMTISGFKRSGHFAEKRLPQRKRPSEEKSREIALVVDEANTSRAIAQGILNSLGIDAYGVPTSEAALELLIMRINYYNFILVDFHMTTIPGPETVRRMRLLGVTTKILGVCPSNSEESRRAFLAAGADACIEKPLNPESLGNIGSATASEAEVDVKKDRVTDALNARRGYSIEGNYNRRKGQQQELAWTIRIITSVIVFVQQFCQTENQEIKTTHGPCCFSYTLLQLIPLNKENMNNHCVPDFEIEMDDDEYPIYTSSGLTRLKKSSMPDEDIMELLWQNGQVVLQSQNQRSLKKPPPVGASTAREIRSSQQEAENYNQNLFMQEDEMTSWLHYPIVDENPLDQNFCADLLYPPPTIVNNNNNNSTMQTPAGTSQTSELQQPPRSVAPRPPIAPTRRTEQVQTRIQNFAHFSKHNVRVQSGPSNSKAVVGESTVVDSSITPNVATASTASETVRSTTEPTDRGGGSASMSSAAIAAPSTGRCIRGKEVMTCDMTVTSSPEDSSGSGEAAHRKAAKDWKRKGRELDDSECQSEDVDFESPDAKKKVRGSTSTKRSRAAEVHNLSERKRRDRINEKMKALQELIPGCNKVNRLADKASMLDEAIEYLKSLQLQVQMMSMGYGMVPMMYPGIQQYMPPMGMGIGMGMGMNRPVMPISGMLAGSALPAATAATHLGPRFPMPPFAMPHVPAPDSSRMQAAQQSDHVITSLGAPDPNQSRIPNFTDPYQQYLGPHQMHLQLNQSQAINQANVSKPSSSRGPDNPENHQSEGI 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00688 769 Gene3D - 552 619 IPR036638 GO:0046983
Bach8g00688 769 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 557 610 IPR011598 GO:0046983
Bach8g00688 769 Pfam Response regulator receiver domain 36 142 IPR001789 GO:0000160
Bach8g00688 769 ProSiteProfiles Response regulatory domain profile. 34 150 IPR001789 GO:0000160
Bach8g00688 769 MobiDBLite consensus disorder prediction 362 397 - -
Bach8g00688 769 MobiDBLite consensus disorder prediction 686 727 - -
Bach8g00688 769 Gene3D - 35 172 - -
Bach8g00688 769 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 560 639 IPR036638 GO:0046983
Bach8g00688 769 FunFam Basic helix-loop-helix transcription factor 552 619 - -
Bach8g00688 769 CDD REC_hyHK_CKI1_RcsC-like 36 145 - -
Bach8g00688 769 MobiDBLite consensus disorder prediction 444 476 - -
Bach8g00688 769 Coils Coil 309 329 - -
Bach8g00688 769 Pfam Helix-loop-helix DNA-binding domain 561 611 IPR011598 GO:0046983
Bach8g00688 769 Coils Coil 563 583 - -
Bach8g00688 769 MobiDBLite consensus disorder prediction 739 769 - -
Bach8g00688 769 MobiDBLite consensus disorder prediction 362 385 - -
Bach8g00688 769 MobiDBLite consensus disorder prediction 537 567 - -
Bach8g00688 769 MobiDBLite consensus disorder prediction 496 567 - -
Bach8g00688 769 SUPERFAMILY CheY-like 35 144 IPR011006 -
Bach8g00688 769 MobiDBLite consensus disorder prediction 507 529 - -
Bach8g00688 769 CDD bHLH_AtPIF_like 557 624 IPR047265 -
Bach8g00688 769 PANTHER TRANSCRIPTION FACTOR PIF3 263 741 IPR044273 GO:0003700|GO:0006355
Bach8g00688 769 SMART finulus 563 616 IPR011598 GO:0046983
Bach8g00688 769 SMART REC_2 33 146 IPR001789 GO:0000160
Bach8g00688 769 MobiDBLite consensus disorder prediction 290 313 - -
Bach8g00688 769 MobiDBLite consensus disorder prediction 693 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00688 Bach-Chr8 4597891 4609580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00688 239 616 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 43.000 1.56e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach8g00688 Response_reg 6e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00688 - - pcin:129287665 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00688 8 4597891 4609580 Bach1g02643 1 37292100 37299163 BWGD
Bach8g00688 8 4597891 4609580 Bach8g00688 8 4597891 4609580 ECH