Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00678 ATGAAAGTCAAGCTTATACTGGATGTGGCTCCTTATGCTGTTTTCCCAGTAATGAATGAGTTAGAGATTGAGATTGCATCGGGCACATATTTGCAGCGGAGTCCAGGTGAAGATAATGGGTGCACTGCTGACAGTCAAAACCAGGGGAAAACTGTAGTTGATATTAACTTGGTTCCATTGGGAGAGAGATTTGATAATACCACTGCAGTTCTGATTTATGAGAGGTTTTGGCATAAGAAAGTTCCTTTAAACTGGAGCCTTTTTGGTGATTATGCAGTAGCATACATTAGTTATCCAGGAATTCCATCATCACCGCCACATGGAGCTTACATGGGAAATGCTCCCAGAGGAAGTGCTAGTAATCTTCCCATTACTGCCAACTTTGTTAACAAGACCCCGAGAATGACACTTAGAACTATAATTATTATTGCCCTATCTGCATTTGTGTTCTTGTTCATTTTGGTTGGAGCATTTTCTATCATTTTGAAATGGAGGAAGATTAGAAGGCCATCCGGTGCTTTTGGTCCTGCTTTCACTTCGTCCATAAACAAGAGATCTGTATTACAAAGCTCTACATCTGTGTCCCTTAAGTCCACCATGGCTACTTCTATTCGCTCTGTTAAAACATTTGCACTTTCGGAGCTTAAGAAAGCAACAGTCAAGTTCAGCTCTAAGAGAGTTTCCAGGGAAGGAGGATTTGGACGTGTTTATCATGGGACATTAGAAGATGGAACTGACGTTGCTGTTAAGTTGCTAACAAGGGACAATCAGAATGGAGACTGTGAATTTATTGCGGAAGTTGAGATGCTTAGCTGCTTGCACCAGCGTAATCTTGTTAAACTCATTGGTATATGCATTGAAGGGTGCAGATGCTGCTTAGTGTATGAACTTGTTAGCAGTGGCAGTGTTGAGTCCCATTTACATGGTGCTGACAAGAAAAAAGGCCCTCTGGATTGGGAAGCGCGGATGAAAATTGCCCTTAGAACTGCTAGAGGGTTGGCTTATCTTCATGAGGATTCTAATCCTCGGTTGGTGGAATGCTGGAGGATTGACCCCACAATTAACTATGGTCAAGCATCATCATTCATCACAATAGAATATAGTTCTGGTCCACTTGAAGGAATGGAAAACAGACCGTTTTCAACTTCAAGCTTGATTGGAGACGAGATATCTTTACCAATTAGGCATGGGAATAGATTGGGCCTCTTGAGAACAGCCCGAAGCAAGCTATCCTTGAGAATCAGACTGTATTCGGATTCCTGTCTTCCTCAACCTGAAAGTGACATTGTCGTGGGATTTGGCGGTGCAGGGGTGGATTTCTTGGCAGTAGTTGGAGCTTTTCCTAGGCCCGACGAGAAGATTAGAAGCACTAGCCTTAAGGTTGAAGGTGGCGGAAATGTGGGGAATGCTTTGACTTGTGCTGCTCGTTTGGGCTTAAAGCCAAGGATTATTTCGAAGGTTGCAAGTGACACCCAGGGTAGGGCTATACTAGAGGAGCTGGAAGCCGATGGTGTGGATACATCCTTTTTAGTGGTCTCTAAGGAGGGTAGTTCGCCATTTACCTATGTCATTGTTGACAGCCAAACGAAAACACGTACTTGTATACACACTGCTGGATATCCTCCCATGATACCAGAAGATCTTTCGCGGGCTAGTTTGTTATCTGCGCTGGATGGAGCAAGAGTGGTTTATTTTGATGTAAGAATGCCCGAAACTGCTCTCGTCATTGCTCAAGAGGCAGCTTACAAGAGAATACCGATCTTAATTGATGCAGAAAGGCCAAGGGAAGGATTGGATGATCTCCTTAGATTGGCTGATTATGTGGTATGCTCAGAAAGATTTCCCCAGGCCTGGACAGGGACATCATCTATTCCAACAGCACTTGTTTCAGTGCTTTTGAGTCGGCCACAAATTAGATTTGTGATTGCAACTTTGGGGAATAAGGGCTGCATAATGCTTGAGAGATGTGCCAATGAGGACCCTCAGACAGAAGAAATGGATGTAGACATCTCAATGGAATCATTAGAGATTCAGAAGAATGATAGCATGGCAATGCCGACCTGCATTTCCTCGTCTGTGACAAAATTTAGAGCAGAAGGGATAGGAACAGTTTGTGGAAGGTTATATGTTGGAACAGCTGAGAAGATTCCACCATCAGAACTTATCGATACAACAGGTGCTGGAGATGCATTCGTTGGAGCCATTCTTTATGCGATCTGTGCCAACTTTTCTCCAGAGAAAATGCTGCCATTTGCTTCTTGTGTGGCAGCTGCCAAGTGCAGAGCTTTAGGAGCTCGAAGTGGTCTTCCGTATCGCACAGATCCGCGCCTGGCTTCCTTTTACCATAGAGCTCCAAGCCAGTGATGGTGTGATCAAGTGTTGCAGAAGAAACGATCGTGGCTTCAGCATAGTCTCCCTTGTAAAATTTGGCTGCCATGGTGTAAACTTATTATTTATGGCTATCCAAGTTTGTGTAGACGAAATGCTTTGACTGAGGTAACTTGTTTCATTTTGTAGTTTTTATTGTCAATAGTTTT 2537 0.4359 MKVKLILDVAPYAVFPVMNELEIEIASGTYLQRSPGEDNGCTADSQNQGKTVVDINLVPLGERFDNTTAVLIYERFWHKKVPLNWSLFGDYAVAYISYPGIPSSPPHGAYMGNAPRGSASNLPITANFVNKTPRMTLRTIIIIALSAFVFLFILVGAFSIILKWRKIRRPSGAFGPAFTSSINKRSVLQSSTSVSLKSTMATSIRSVKTFALSELKKATVKFSSKRVSREGGFGRVYHGTLEDGTDVAVKLLTRDNQNGDCEFIAEVEMLSCLHQRNLVKLIGICIEGCRCCLVYELVSSGSVESHLHGADKKKGPLDWEARMKIALRTARGLAYLHEDSNPRLVECWRIDPTINYGQASSFITIEYSSGPLEGMENRPFSTSSLIGDEISLPIRHGNRLGLLRTARSKLSLRIRLYSDSCLPQPESDIVVGFGGAGVDFLAVVGAFPRPDEKIRSTSLKVEGGGNVGNALTCAARLGLKPRIISKVASDTQGRAILEELEADGVDTSFLVVSKEGSSPFTYVIVDSQTKTRTCIHTAGYPPMIPEDLSRASLLSALDGARVVYFDVRMPETALVIAQEAAYKRIPILIDAERPREGLDDLLRLADYVVCSERFPQAWTGTSSIPTALVSVLLSRPQIRFVIATLGNKGCIMLERCANEDPQTEEMDVDISMESLEIQKNDSMAMPTCISSSVTKFRAEGIGTVCGRLYVGTAEKIPPSELIDTTGAGDAFVGAILYAICANFSPEKMLPFASCVAAAKCRALGARSGLPYRTDPRLASFYHRAPSQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00678 787 SUPERFAMILY Protein kinase-like (PK-like) 188 338 IPR011009 -
Bach8g00678 787 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 723 736 IPR002173 GO:0016301
Bach8g00678 787 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 419 781 - -
Bach8g00678 787 SUPERFAMILY Ribokinase-like 430 773 IPR029056 -
Bach8g00678 787 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 193 297 - -
Bach8g00678 787 Gene3D Phosphorylase Kinase; domain 1 192 297 - -
Bach8g00678 787 Gene3D - 429 767 IPR029056 -
Bach8g00678 787 Pfam Protein tyrosine and serine/threonine kinase 230 339 IPR001245 GO:0004672|GO:0006468
Bach8g00678 787 ProSiteProfiles Protein kinase domain profile. 222 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00678 787 Pfam pfkB family carbohydrate kinase 713 770 IPR011611 -
Bach8g00678 787 Pfam pfkB family carbohydrate kinase 434 657 IPR011611 -
Bach8g00678 787 PRINTS Ribokinase signature 459 478 IPR002139 GO:0016301
Bach8g00678 787 PRINTS Ribokinase signature 600 615 IPR002139 GO:0016301
Bach8g00678 787 PRINTS Ribokinase signature 432 453 IPR002139 GO:0016301
Bach8g00678 787 PRINTS Ribokinase signature 641 652 IPR002139 GO:0016301
Bach8g00678 787 CDD ribokinase_group_B 429 771 - -
Bach8g00678 787 Gene3D Transferase(Phosphotransferase) domain 1 298 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00678 Bach-Chr8 4489609 4499450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00678 1 346 Receptor kinase-like Gene Family AT5G56890 47.170 4.92e-84 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bach8g00678 PfkB 1.9e-21 CL0118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00678 - - qsa:O6P43_006820 561.607