Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00676 ATGGCTACTCAAGGTCAAGTCATTACGTGCAAAGCGGCGGTGGCTTGGGAACCCAACAAGCCATTGACGATAGAAGACGTTCAGGTGGCTCCGCCGCAGGCTGGGGAGGTCAGAGTCCAAGTCTTGTTTGCTGCTCTCTGTCACACCGATGCTTATACATGGGGCGGCAAGGATCCGGAAGGCCTCTTCCCATGCATTCTTGGTCATGAAGCTGCCGGGATTGTTGAAAGTGTTGGAGAAGGTGTTACTGAAGTTAAGCCAGGAGATCATGTCATCCCCTGTTACCAGGCTGAATGCAAAGAATGTAAGTTTTGCAAATCTGGCAAAACAAACCTTTGTGGCAAAGTTCGTACTGCCACTGGAGCTGGGGTTATGCTGAGTGATCGCAAGAGTCGTTTCTCTATTAATGGAAAGCCCATCTATCATTTTATGGGAACCTCAACATTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGATCCGAAAGCTCCTTTGGAGAAAGTATGTCTTCTCGGATGTGGGGTTGCAACTGGCCTTGGAGCTGTATGGAACACTGCAAAGGTGGAACATGGTTCAATTGTCGCTGTTTTTGGACTTGGAACTGTTGGGCTTGCTGTTGCAGAGGGTGCAAAAGCCGCTGGTGCATCACGGATTATTGGCATAGATATTGACAGCAAAAAGTTTGATATAGCAAAGAATTTCGGAGTCACTGAATTTATTAATCCAAAAGACCATGACAAACCAATTCAGCAAGTCATAGTTGATCAAACCGACGGTGGAGTTGACTATAGTTTTGAGTGCATTGGAAATGTCTCAGTGATGAGGGCTGCTTTGGAATGCTGCCACAAGGGTTGGGGGACGTCAGTTATTGTGGGTGTTGCAGCATCAGGGCAGGAAATATCAACTCGCCCTTTCCAGTTGGTGACCGGCCGTGTCTGGAAGGGAACTGCTTTTGGTGGATTCAAGAGCCGTTCACAAGTGCCTTGGCTTGTAGACAAGTATTTGAAGAAGGAAATCAAGGTTGATGAGTACATTACCCACAATTTGACACTTGCCGAGATCAACAGGGCATTTGATCTTATGCATGATGGAGGATGTCTTCGTTGTGTGCTTGCAATGTTCTAATCTGGCCTTCCCCAAGTTCCCAAGGAATGCAAGTGTTTGGTTTCCTTATCTCTTCCCCTTGTTTGCGTGGTTGAAGTAAAATAAACTTGAGTGGCTGTAAGTTATAAGATTATGACTCTTGTTTATCTTCATGAAGTCTCTGCACAAACTAACGTGTTCCCTTACTTCTACAACGCGAACTCATGAAGTCTTATCAATGGGTATATCAG 1346 0.4547 MATQGQVITCKAAVAWEPNKPLTIEDVQVAPPQAGEVRVQVLFAALCHTDAYTWGGKDPEGLFPCILGHEAAGIVESVGEGVTEVKPGDHVIPCYQAECKECKFCKSGKTNLCGKVRTATGAGVMLSDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVATGLGAVWNTAKVEHGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDIAKNFGVTEFINPKDHDKPIQQVIVDQTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYLKKEIKVDEYITHNLTLAEINRAFDLMHDGGCLRCVLAMF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00676 378 Gene3D - 13 372 - -
Bach8g00676 378 SUPERFAMILY GroES-like 326 375 IPR011032 -
Bach8g00676 378 Gene3D - 182 320 - -
Bach8g00676 378 Pfam Zinc-binding dehydrogenase 206 330 IPR013149 -
Bach8g00676 378 SUPERFAMILY GroES-like 3 198 IPR011032 -
Bach8g00676 378 NCBIfam S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 377 IPR014183 GO:0006069|GO:0008270|GO:0051903
Bach8g00676 378 FunFam S-(hydroxymethyl)glutathione dehydrogenase 182 320 - -
Bach8g00676 378 FunFam S-(hydroxymethyl)glutathione dehydrogenase 13 201 - -
Bach8g00676 378 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Bach8g00676 378 CDD alcohol_DH_class_III 8 375 IPR014183 GO:0006069|GO:0008270|GO:0051903
Bach8g00676 378 PANTHER ALCOHOL DEHYDROGENASE 5 375 - -
Bach8g00676 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 341 IPR036291 -
Bach8g00676 378 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00676 Bach-Chr8 4474958 4478306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00676 10 331 Monolignol Biosynthesis Gene Families AT1G72680 27.356 5.68e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00676 K00121 - cave:132165797 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00676 8 4474958 4478306 Bach8g00676 8 4474958 4478306 ECH