Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00665 CCATGTTGCACCTAACCATTCCTTTCCCTGCTTTTCTAAATTCCACCAAACATATCAATCACACAATCCATGCCCTTTTCTTCTATTTTTCTCACAAAACTTAGCTTCAAATTAATCCACTCCTGCACCCTTTTTTCTCATCATAATTCGTCTTCTTCTTCAACATCTTCGTGGGTCTGAAAGCCTGAAAGCATAGTTCGATGCAGGGCGCCGGTGGCAGCGTTGGAGCATTTTCCGGTGATTCTAAGATGTCAACGGTGTCTAAAGATCATAACTTGGTCCTATCTTCGGAGGATTCTTCATGCCCGGATGAGTCTGACCTTGAATTGGGTCTTGGGTTAAGCCTTTCTCGTCCTTGTGGGAAGGCTCACCCAACTTCAACAACTCAATATGCAAGAATTTTGACGGCCGACGATTTTCCTTCAGCAGTTTCTTCTACTTCTGCGTCTTCAACTTCTTCCTCCTCTACTCCTTCCTCGTTGAGTAGGGCTAACGTCTCAGCTGGTACCAAGAGAACTGCTGATTCCGTTGTCGCTAACAACGGTCCCAGTCAGGTTGTAGGATGGCCTCCCCTTGGAACCTATAGATTGAATAACTTCAACAACCATGGAAAATCACCAGCTACTGAAGCATTCAACTCAATGATTGAGAAAAGCAAGAGCAATAATGCTGCCGTGAGGAACAATACTGACAATGGCAGTGATAAAAACATCAGTCCCAAAGATAAAGGACACCCCAGGAGTTCCCTGTTTGTGAAGGTAAATATGGATGGGGTAGCAATTGGAAGGAAGGTTGATTTGAGTGCTCATAGTTCCTATGAAACCTTAGCACGAACTTTGGAGGATATGTTTAGTGAACCCACTACAGGCCTTACTTGCAATATAGGATCAAATGGGGAGGATCATGGCATTATAGTTGGAGCAGAAAGACAGTCAAGGTTGCTTGACGGATCTTCCAAGTTTGTGCTCACTTATGAAGATAAGGAAGGAGACTGGATGCTTGTTGGAGATGTTCCATGGAGGATGTTCCCTAGCTCTGTGAAGAGACTGAGAATCATGAGGACATCGGACGCTAATGGACTTGCACCAAGATTGGAAGAAAAGAACAGCAGACAGAAAAGCAAGCCCATCTAGATATGCTTTGCATGGCACAAAGGAAAGAAGTTTTGGCGTGAAACAAAATAAAATACATGAATAGAAGAGGTAAAACAAACATTGAAAAAGAAAAGTAAAGGTATAATGCTAAGTCAATGAATTTTGGGAATTAACGATCAAAACACGGCTTTTTGGTTTGATTTTTTTTTTTTTTTGAATTATATTCGTTTTATTCGTCGCCGCCCCACCATTCTTCACTTGTCGTGTTGGCGCCGGCATTATAGGATTTATGTAATAATACTCACGCGTATAAGTCTACTGTTTC 1419 0.4228 MQGAGGSVGAFSGDSKMSTVSKDHNLVLSSEDSSCPDESDLELGLGLSLSRPCGKAHPTSTTQYARILTADDFPSAVSSTSASSTSSSSTPSSLSRANVSAGTKRTADSVVANNGPSQVVGWPPLGTYRLNNFNNHGKSPATEAFNSMIEKSKSNNAAVRNNTDNGSDKNISPKDKGHPRSSLFVKVNMDGVAIGRKVDLSAHSSYETLARTLEDMFSEPTTGLTCNIGSNGEDHGIIVGAERQSRLLDGSSKFVLTYEDKEGDWMLVGDVPWRMFPSSVKRLRIMRTSDANGLAPRLEEKNSRQKSKPI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00665 310 MobiDBLite consensus disorder prediction 12 34 - -
Bach8g00665 310 MobiDBLite consensus disorder prediction 156 181 - -
Bach8g00665 310 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 40 292 IPR003311 GO:0005634|GO:0006355
Bach8g00665 310 Gene3D - 178 300 - -
Bach8g00665 310 Pfam AUX/IAA family 82 297 IPR033389 -
Bach8g00665 310 SUPERFAMILY CAD & PB1 domains 179 286 - -
Bach8g00665 310 ProSiteProfiles PB1 domain profile. 182 290 IPR000270 GO:0005515
Bach8g00665 310 MobiDBLite consensus disorder prediction 75 115 - -
Bach8g00665 310 MobiDBLite consensus disorder prediction 1 41 - -
Bach8g00665 310 FunFam Auxin-responsive protein 177 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00665 Bach-Chr8 4368397 4371232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00665 186 297 B3 DNA Binding Superfamily AT1G59750 30.357 6.23e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach8g00665 AUX_IAA 5e-60 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00665 K14484 - gmx:100779400 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00665 8 4368397 4371232 Bach1g02677 1 37574313 37577419 BWGD
Bach8g00665 8 4368397 4371232 Bach8g00665 8 4368397 4371232 ECH