Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00655 ATGACCTCGAATCCCATGGCTGCTGGCTTAGTCACTGGTTCTCATTCACGTAATGAACTACGTTTCTCAAATGACGATTCTGATGAGCAACGGCCTGCTACTCTTCAATCTGCATCGAAAATATGTCGGATTTGCGGGGATGAGATAGGATATAAGGAAGATGGACAGGTGTTTGTTGCTTGTCATGTGTGTGGTTTCCCTGTTTGTCGACCCTGTTATGAGTATGAGAGGAGTGAAGGGAACCAGTGCTGCCCTCAATGCAATACCCGCTATAAGCGTCATAAAGGATCTCCCGGGGTTGTTGGAGATGAAGATGATCCTTTTGATCATGATGATTTTGATGATGAATTTCAGATTAAGAATCGTCATGACCAGGACGATTCTGCTCGCCAACATGACAACAATCATGTGGAGAATGGAGACTATGATAAACAACAGTGGCATGCCAATGGTCAGGCTTTCTCTTCAGCCGGAAGTGTTGCTGGTAAGGATTTTGAAGGCGACAAAGAGTTCTACAGCAATGCAGAGTGGAAAGACAGAATGGAGAAGTGGAAAGTGAGGCAAGAAAAGAGAGGTTTATTAAACAAAGACGACGGAAAAGATGATCAAGCTGAAGATGATGAATACATTTTGACTGAAGCGAGGCAGCCATTGTGGCGTAAAGTCCCAGTATCTTCAAGCCTAATAAATCCATATCGCATCGTCATCATCCTTCGGCTTATCATCCTAATTTTCTTCTTCCGTTTCCGTATCTTAACTCCAGCATATGACGCATTCGCCTTATGGCTCATCTCTGTAATCTGCGAAATCTGGTTTGCTTTGTCGTGGATACTTGATCAATTCCCCAAATGGTACCCTATCACTCGCGAAACCTATCTGGATCGCTTGGCCATTAGGTTTGAGCGTGAAGGAGAGCCAAACCGTCTAGCCCCAGTTGATGTCTTTGTGAGTACTGTGGACCCTTTGAAGGAACCACCCATTATAACAGCAAACACGGTTCTTTCAATCTTATCTGTTGATTACCCTGTTGAGAAGGTCAGCTGCTATGTATCAGATGATGGTGCATCTATGCTTCTTTTTGATACATTATCAGAAACTGCTGAATTTGCAAGGAGATGGGTTCCTTTCTGTAAGAAGTATATCATTGAGCCTAGGGCTCCTGAGTACTACTTCTCTCAGAAAATTGATTACTTGAAAGATAAAGTGCAGCCCACATTTGTAAAGGAACGAAGGGCCATGAAGAGAGAATATGAAGAATTTAAAGTGAAAATCAATGCTTTGGTAGCAAAGGCTCAGAAGAAACCAGAAGAGGGGTGGGTGATGCAGGATGGCACCCCATGGCCTGGGAACAACACTCGTGATCATCCTGGCATGATTCAGGTCTATCTGGGAAGTGAAGGTGCACTGGACGTGGAAGGCAAGGAACTGCCACGGCTTGTGTATATTTCACGTGAAAAACGTCCGGGCTATGCACACCACAAGAAAGCTGGTGCCATGAATGCTCTTGTTCGAGTTTCTGCTGTGCTTACCAATGCACCTTTCATGTTGAATTTGGATTGTGACCACTACATCAACAATAGCAAGGCTGTAAGGGAGGCTATGTGCTTTTTGATGGACCCCCAGCTCGGGAAGAAGCTCTGCTATGTCCAATTTCCACAAAGATTCGATGGTATTGATCGCCACGATAGATATGCTAACCGCAATGTTGTGTTCTTTGATATTAACATGAAAGGTCTTGATGGTATTCAAGGTCCGGTATATGTTGGTACCGGAACTGTGTTCAACAGGCAGGCATTATACGGCTATGATCCACCAGTATCTGAGAAAAGGCCAAAAATGACCTGTGATTGCTGGCCTTCATGGTGTTGCTGTTGTTGTGGTGGTTCAAGAAAGTCCAAGTCGAAAAAGAAATCGGGAGGTTTCTTTAGTGGATTATACAGCAAGAAGAAGAAAATGATGGGCAAAAACTACGTGAGGAAAGGATCTGGTTCCATGTTTGATCTTGAGGAGATTGAAGAAGGGTTTGAAGGCTATGATGAACTTGAGAAATCGTCACTCATGTCCCAGAAAAACTTTGAGAAGCGGTTTGGGCAGTCTCCAGTTTTCATTGCTTCCACTTTGATGGAAAATGGTGGACTTCCAGAGGGCACCAATAGCCAATCACTGATTAAGGAGGCCATTCATGTTATAAGCTGTGGCTATGAAGAGAAAACCGAATGGGGCAAGGAGATTGGATGGATTTATGGGTCAATCACAGAAGATATTTTGACAGGGTTTAAGATGCATTGCAGAGGATGGAAGTCAGTGTACTGCATGCCAAAGAGGGCAGCTTTCAAGGGATCTGCCCCAATAAATCTATCAGATCGTTTGCACCAAGTTCTGAGATGGGCTCTTGGTTCTGTTGAAATTTTCCTTAGTCGTCATTGCCCATTGTGGTATGGCTATGGAGGCAAATTGAAATTGCTAGAGAGGCTTGCTTACACTAATACCATCGTTTACCCATTCACTTCCATTCCTCTGCTGGCATACTGCACAATTCCAGCCGTCTGTCTTCTGACTGGGAAGTTCATCATACCCACTCTTACCAACTTTGCCAGCGTTTGGTTTATGGCTTTATTTATCTCTATCATTTTAACTGCTGTGCTTGAACTGCGATGGAGCGGGGTTAGCATTACGGATTTGTGGCGAAATGAGCAATTCTGGGTCGTCGGAGGTGTCTCTGCGCATCTTTTTGCTGTATTTCAAGGTCTTCTTAAAGTTCTTGCTGGAGTAGACACCAATTTCACTGTCACAGCAAAAGCAGCAGACGATACTGAATTTGGAGAGCTCTATCTCTTCAAGTGGACTACTCTTCTCATCCCACCGACCACTCTTATAATCGTGAATATTGTGGGAGTTGTGGCTGGAATCTCTGGTGCGATTAATAATGGCTATGGTTCATGGGGACCATTGTTTGGGAAGCTATTTTTTGCCTTCTGGGTCATTGTGCATCTATATCCTTTTCTCAAAGGTCTAATGGGAAGGCAAAACAGGACTCCTACCATTGTAGTCCTCTGGTCAATTCTTCTGGCTTCCATTTTCTCCTTGATTTGGGTCCGGATTGATCCTTTCTTGCCCAAGCAAACTGGTCCAGTACTCAAACAATGTGGGATAGAGTGCTAA 3162 0.4412 MTSNPMAAGLVTGSHSRNELRFSNDDSDEQRPATLQSASKICRICGDEIGYKEDGQVFVACHVCGFPVCRPCYEYERSEGNQCCPQCNTRYKRHKGSPGVVGDEDDPFDHDDFDDEFQIKNRHDQDDSARQHDNNHVENGDYDKQQWHANGQAFSSAGSVAGKDFEGDKEFYSNAEWKDRMEKWKVRQEKRGLLNKDDGKDDQAEDDEYILTEARQPLWRKVPVSSSLINPYRIVIILRLIILIFFFRFRILTPAYDAFALWLISVICEIWFALSWILDQFPKWYPITRETYLDRLAIRFEREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVEKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKYIIEPRAPEYYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVKINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYISREKRPGYAHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKSGGFFSGLYSKKKKMMGKNYVRKGSGSMFDLEEIEEGFEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMENGGLPEGTNSQSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKLLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNFASVWFMALFISIILTAVLELRWSGVSITDLWRNEQFWVVGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDTEFGELYLFKWTTLLIPPTTLIIVNIVGVVAGISGAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGIEC 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00655 1053 CDD mRING-HC-C4C4_CesA 40 90 - -
Bach8g00655 1053 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 116 IPR013083 -
Bach8g00655 1053 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 215 1020 - -
Bach8g00655 1053 MobiDBLite consensus disorder prediction 94 142 - -
Bach8g00655 1053 Pfam Cellulose synthase 312 1046 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bach8g00655 1053 SUPERFAMILY RING/U-box 27 110 - -
Bach8g00655 1053 Coils Coil 410 430 - -
Bach8g00655 1053 FunFam Cellulose synthase 429 603 - -
Bach8g00655 1053 MobiDBLite consensus disorder prediction 1 33 - -
Bach8g00655 1053 MobiDBLite consensus disorder prediction 113 142 - -
Bach8g00655 1053 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 418 604 IPR029044 -
Bach8g00655 1053 SUPERFAMILY Nucleotide-diphospho-sugar transferases 325 865 IPR029044 -
Bach8g00655 1053 FunFam Cellulose synthase 25 116 - -
Bach8g00655 1053 Pfam Zinc-binding RING-finger 36 106 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00655 Bach-Chr8 4323244 4328244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00655 7 1053 Cell Wall Biosynthesis AT5G17420 66.542 0.0 1427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00655 K10999 - qsa:O6P43_006855 1855.11