Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00653 ATGGAGGATTCTGGCAAGAGTAGCAGTAATAACCAGAAAATAGTGAACCAATGGGTGCTTCAATTCCAGAAAATGGGTCTTGAGCTCAAGTGCCCTCTCTGTTTAAACGTGTTCAGTAGGCCAATGTTACTGCCATGCAACCACATATTCTGCAAGTCCTGCATATCTGATTGCCTAGTGCCTGGATCAGAATGTGCTGTCTGTAATACTCAGTATGCTCATAGGGATCTAAGGCAGGTACCTTTTGTTGAAAGCATGGTAACGATCTATAGAAGTTTGGATGCCACCTTTTCTGCCAATATGTTACAGCAACTTTCTTCTGATGACATGAGGATTTTGGAGCCGTGCCAAGCATTGTTGAATTCAAATTTGAGTAATAAATCAGCTGAGAAACTGAGTGGCGTTGTAGTATGTGGAGAATCTGAGGAATGTTTGCAGCTGGAAATTAGGGGCCATGAAGAGTATGGAGTTGAGGAAATGGAAATGGAAACAAATCAAGTGACACAGTCATTGCCAGACAGCCCTCCATTTTGTGATACCAAAGGTTCAGATAATGACTGCAGTGATCAAGACAGTGCACATATCTTGGTTGCTGAAAAATTGAAGAGTTCTTCATTGAAGAGAGGAAGTAAAGCAAATGGAAATTTGGAAGGAAGAACACTGCAATTAAGGTCTGAAAATTCTGCTTCTAAAAGTGATGGTCTCATGAGAGAGTTCAAGAGGCAAAAGAATCTTAACCATGGAGTATCAAATGAAAGCTTGAAAGGTGACATTCACATTCAAATTCAACCTAGCGTCACACAACATAGTAAATCGGTGGATTCCAGCTGTAACCTGGAACTTAAATCTGGAATGGACAACGGTAAACTTCTGCCGACAATTCCAGACAATTCATGTTCAAATACAAGCATCTGTTCATTTTGTCAATCCTCTAAAATCTCAGAGGTTACTGGACCAATGTTGCATTATGCAAATGGGAATTTGGTAACAGGAGATGCAGCAGTGCAGCCAAATGTCATACATGTGCATGGAGTTTGCCTTGACTGGGCACCACAAGTGTATTTTGTTGGTGAATCTATTAAGAATTTGAAGGCAGAAGTCGCAAGAGGAGCAAAGCTTAAATGCAGCAAATGTGGTCTAAAGGGAGCTGCTCTTGGCTGCTATGTCAAATCTTGTAGAAGAACTTATCATGTTCCTTGTGCAATGAAAATCTCAACTTGCCGATGGGATTATGAGGACTTTCTTATGCTCTGTCCTGCTCATTGTCATGTCAGATTCCCAAATGAGAAATCCAAGTCTAAGAAAGATACTTCCAAGAAGCATCCTGTGACATCTCATTTGGTATCTCAGCCATCAAAATCTTTGGAAGCTTCAACCAATGATTGCAAAGACTGGGTTTTTTGTGGATCTGCTCTATCTACTGAAGAAAAGATACTTTTGATCAATTTGGCAAGTAGGATTGGTGCAACTGTGACCAAGTTCTGGACCACAAAAGTCACACATGTGATTGCAGCAACCGATAACAATGGTGCATGCTCCAGGACATTGAAGGTTCTTATGGCCATTTTGAATGGACGATGGGTTCTTAAAATGGATTGGGTAAGAGCGTGCATGGAAGTGACACATCCTGTGGAGGAAGAACCATATGAAATTAGTCTTGACAACCATGGGTGTCATGATGGCCCAAGAACTGGCAGACTTCATGCATTGACCAATGAGCCCAAGCTATTTAGTGGCTTAAATTTTTATTTATCTGGTGATTATGTGCCATTTTATAAGAAACATCTTGAGGACTTGGTTGTAGCAGGAGGAGGTTCTGTTTTGGGAAGCAAAGAAGAATTGGTAGCAAAAGGTCATGAATGCGAGGCAACTTCTTCAAAGCTGCTTGTTGTTTACAATCTTGATCCCCCACAAGGACGTAGGTTAGGGGAGGAAGTATCAATTCTTTGGCAGAGATTGAGTGAGGCAGAGGATTTGGCTGCTAAAACTGGTTCCCAGGTCATTGGTCACACATGGCTTTTGGAGTCAATTGCTGCATGTAAGTTGCAGGCTTTTGTCAGCTAAAATGTATTAAGCAGCTGATGCCCCCTCTTGTATAGATCACAAGCTTCTAATTTTGCTCGTTGAATTTCCTGTTGAAAGTTGTTTGATCGCCTAGATAAAGCTCTGCAATTGTTCAACATGCAAGCTACCTCAATGGGGCGTTCATTCTGCTAAGTATTGGAATATCGTGTACAGGATATCAAATGAAATTCTATCCTACTTTGACAGTTAAAAATTTTGTATATGTAACGTTAAGCTGGTCTTGAACTGACTTGAA 2320 0.4095 MEDSGKSSSNNQKIVNQWVLQFQKMGLELKCPLCLNVFSRPMLLPCNHIFCKSCISDCLVPGSECAVCNTQYAHRDLRQVPFVESMVTIYRSLDATFSANMLQQLSSDDMRILEPCQALLNSNLSNKSAEKLSGVVVCGESEECLQLEIRGHEEYGVEEMEMETNQVTQSLPDSPPFCDTKGSDNDCSDQDSAHILVAEKLKSSSLKRGSKANGNLEGRTLQLRSENSASKSDGLMREFKRQKNLNHGVSNESLKGDIHIQIQPSVTQHSKSVDSSCNLELKSGMDNGKLLPTIPDNSCSNTSICSFCQSSKISEVTGPMLHYANGNLVTGDAAVQPNVIHVHGVCLDWAPQVYFVGESIKNLKAEVARGAKLKCSKCGLKGAALGCYVKSCRRTYHVPCAMKISTCRWDYEDFLMLCPAHCHVRFPNEKSKSKKDTSKKHPVTSHLVSQPSKSLEASTNDCKDWVFCGSALSTEEKILLINLASRIGATVTKFWTTKVTHVIAATDNNGACSRTLKVLMAILNGRWVLKMDWVRACMEVTHPVEEEPYEISLDNHGCHDGPRTGRLHALTNEPKLFSGLNFYLSGDYVPFYKKHLEDLVVAGGGSVLGSKEELVAKGHECEATSSKLLVVYNLDPPQGRRLGEEVSILWQRLSEAEDLAAKTGSQVIGHTWLLESIAACKLQAFVS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00653 687 Pfam PHD-like zinc-binding domain 343 421 - -
Bach8g00653 687 FunFam Breast cancer associated RING 1 299 424 - -
Bach8g00653 687 Pfam BRCA1 C Terminus (BRCT) domain 469 538 IPR001357 -
Bach8g00653 687 Gene3D BRCT domain 462 567 IPR036420 -
Bach8g00653 687 SUPERFAMILY BRCT domain 464 552 IPR036420 -
Bach8g00653 687 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 299 424 IPR013083 -
Bach8g00653 687 SUPERFAMILY BRCT domain 576 683 IPR036420 -
Bach8g00653 687 PANTHER BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 207 684 IPR031099 GO:0006281|GO:0006974
Bach8g00653 687 SMART BRCT_7 459 541 IPR001357 -
Bach8g00653 687 SMART BRCT_7 574 680 IPR001357 -
Bach8g00653 687 SMART ring_2 31 68 IPR001841 -
Bach8g00653 687 ProSiteProfiles BRCT domain profile. 466 551 IPR001357 -
Bach8g00653 687 MobiDBLite consensus disorder prediction 430 452 - -
Bach8g00653 687 ProSiteProfiles Extended PHD (ePHD) domain profile. 302 422 IPR034732 -
Bach8g00653 687 Gene3D BRCT domain 572 687 IPR036420 -
Bach8g00653 687 Pfam RING-type zinc-finger 31 56 IPR027370 -
Bach8g00653 687 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 103 IPR013083 -
Bach8g00653 687 CDD BRCT_Bard1_rpt1 465 544 - -
Bach8g00653 687 ProSiteProfiles Zinc finger RING-type profile. 31 69 IPR001841 -
Bach8g00653 687 ProSitePatterns Zinc finger RING-type signature. 46 55 IPR017907 -
Bach8g00653 687 FunFam Breast cancer type 1 susceptibility protein homolog 462 568 - -
Bach8g00653 687 ProSiteProfiles BRCT domain profile. 572 677 IPR001357 -
Bach8g00653 687 SUPERFAMILY RING/U-box 28 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00653 Bach-Chr8 4310370 4316125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00653 28 80 C3H Transcription Factor Family AT3G07200 35.849 3.33e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00653 K10683 - gmx:100784883 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00653 8 4310370 4316125 Bach8g00653 8 4310370 4316125 ECH