Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00630 CATGGGCATCAAGATGAACGGCTTTACTCATCCTTATGATTCATAAATCACTTGCAGACTTCCATTCGCGTTCTAGTTTAACAACCATGCATATAGGTCAGACGGACACAACTTCAGTAAAATGCCTTATCAACAGCATTTCTCGATTTGTTCTCCTAGTTTCTTGCCAGAGAGGGCAACCTATGCCCTTTGAGAAAAATTTTAGTAATATGATTGGTGTGTTAAAGCGTTTGAAACCAGTGCTTGATGATGTTGTTGATCATAAAATCCATTCAGATGAAATTCTATGTAAAGGGTGTGAAGAATTGGATATGGTTGTTAATGAAGCTACAGAGTTCATGGAGAAATGGTGCCCAAAGATGAGCAAAGTTCATACTGTTCTACAAAGTGGACAGTTATTGATGAAAATTCAGAGATCTTCGCTTGAGATTTGTCACATTATATTTAGATCCCTACAATCATCTCCATCTACTTCAGTTTTAGATGGTCTTCAGCACTATATGCAGGAACTTCAATGTTTGAAGAAGGAAACAGCAACTATGCATATAGAAGAGGCCCTGATAAAACAAAGAGAAGATACTGAATCTAGCAATGAACATGTTAAGAAAATTATTGAGTTACTTAACTTGAAATCAAACCAGGAACTCTTGAAAGAAAGTATTGCTGTGGAAAAGGAAAGGTTGAATGCTGAAGCCAATAAAAAGAAAGGGCAATTAGATGAAATTGACCAAATTGTGAATCTTGTCTGCAAGTTACGTGATTATACCATGAAATTTGAGCTCCTTGAGGTCAAAAGTGGGGTCTCAGTCCCTGCATACTTCCGCTGTCCCTTATCTCTTGAACTCATGTTGGATCCTGTTATTGTGGCTTCTGGTCAGACATATGAGAGGCTGTCCATCCAAAAGTGGCTTGATCATGGCTTTACTGTTTGTCCCAAAACACGTCTGAGACTTACCCATACAAATCTCATTCCCAATTATACTGTCAAAGCTATGATAGCAAATTGGTGCGAGGAAAATAATGTCAAGCTTCTGAATAACCCCGTGCTCAATAATTCTGTCTGTGTCACATCCTCCTCAGATGATTTATTGCCTCAAGATTTAGCTTGTGCAAATAGTTATGGACTTTTACATGGTAGCAATTCCACTTCAAGATCATCTTTTCAGAGTATTAATGCATTTGAGCAACCAAAGGGAGATATGTCTTCCAGATTAAGTGGAGAATCCAACGGATGTCAGAGTGGAGAAACAGAAAAATTTGAGCAACAATCTCTTGCACCATCATATGTTTACAGCAGAAGTGAATCATTCTCAAGTTCTATTTCTAGTACTGATTATGTAGTTCCTGTTTCAAAAGAGTTGTCAGGGATATCAATTAAGCACGAAAATGTCCATGAGTTTTCTGGAGAAATCACAAATAGGGGTCCTGCTTCTTCTCCTGCAAATAAAGAGTCAGGGAGTTCTCATTGTTTATCAGGAAAACAATTTGTAAACCCTAGACCAAAAATTGGCATAATAGAGAATGGAAATGAAGATAGTCATTCTAGAGGGAGTTCTCATGTGCACAAGTTGATTGAAGACCTTCAAAGCCAATCAAATGAAGTGCAAACTAGGGCTGCAGAAGAATTGAGGCTCCTTACAAAGCATAGCATGGAAAACCGTATCATTATAGGCCAGTGTGGGGTTATCGTGCCTTTACTTTCGCTGCTATATTCTGATAAGAAACTCACACAAGAGCATGCGGTGACAACTTTGCTGAATTTATCAATTAATGAAGACAACAAGGTCTTGATTGCTGAAGCAGGAGCAATAGAACCTCTTATTTATGTTTTGAAAACAGGAAATGATGGAGCCAAGGAGAACTCTGCAGCAGCTTTATTCAGCCTCTCTGTGATTGAAAACAATAAGGAAAAAATTGGCCGTTCTGGTGCAGTTAAAGCTTTGGTGAATCTTCTAGGCTCAGGAACTCTAAGAGGGAAAAAGGATGCTGCTACTGCTTTATTTAATCTATCAATCTTTCATGAGAATAAAGCTCGTATGGTTCAAGCTGGAGCTGTGAAGTATCTGGTTCAGTTAATGGACCCTGCTGATCGAATGGTTGACAAGGCTGTTGCTCTACTGGCGAACCTGTCAACAATTGCAGAGGGCCGCTTAGCAATTGCAAGGGAAGGGGGCATTCCCTCACTGGTTGAACTTGTTGAATCAGGTTCCCCGAGGGGAAAGGAAAATGCTGCTTCCATTCTCTTGCAACTATGCCTTCATAGTCCCAAATTTTGTACCCTGGTTCTGCAAGAAGGTGCTGTACCTCCCCTTGTTGCATTATCTCAGTCTGGTACGCCACGAGCAAAGGAAAAGGCACAACAGCTTCTCAGTCATTTTCGTAGTCAACGGGAAGGAGCCACTGGCAAGGGGAAATCATAGACAGTTTTCGTCCCTATTTGTTTTTTCTTTCCTTAGTTACTAATGAGAAACATCTTCTTCCCTCTTCCATTGCTCTTATACAAGGCTTTGTGAACTGCTTTTCGTATATCCCTTTGATCCTTTCTTTCAATTATTTCATAATTATAGTCATGAGCTGTTTGCTGCTCTTGTGTGGCTTGTCATAGTTTACGCTTCCACGATGCCTGTCTTCTCTATCCTCTTCTCAAATTCTCAGTGGTAATTAGTTCCCATTTTCTTTTCATTGAATTTTTATTCTTTTATTTTTTTTTACATGGGGTAGGCTGTATTGCTCTTTTTTTCTGATGATGTAGTTCTGCAAGATGTAGACTTGAAATGCTGGAGCATTTGAATCAAGACTGATAAGGTCCAAAATGAGTGTTGTACATTTGTGTACATACATGTAATAGTATCCTGTGATCTGCTATAAATTATTGTATTTTATTCTGCACATTTATGTTTTAA 2903 0.3896 MIHKSLADFHSRSSLTTMHIGQTDTTSVKCLINSISRFVLLVSCQRGQPMPFEKNFSNMIGVLKRLKPVLDDVVDHKIHSDEILCKGCEELDMVVNEATEFMEKWCPKMSKVHTVLQSGQLLMKIQRSSLEICHIIFRSLQSSPSTSVLDGLQHYMQELQCLKKETATMHIEEALIKQREDTESSNEHVKKIIELLNLKSNQELLKESIAVEKERLNAEANKKKGQLDEIDQIVNLVCKLRDYTMKFELLEVKSGVSVPAYFRCPLSLELMLDPVIVASGQTYERLSIQKWLDHGFTVCPKTRLRLTHTNLIPNYTVKAMIANWCEENNVKLLNNPVLNNSVCVTSSSDDLLPQDLACANSYGLLHGSNSTSRSSFQSINAFEQPKGDMSSRLSGESNGCQSGETEKFEQQSLAPSYVYSRSESFSSSISSTDYVVPVSKELSGISIKHENVHEFSGEITNRGPASSPANKESGSSHCLSGKQFVNPRPKIGIIENGNEDSHSRGSSHVHKLIEDLQSQSNEVQTRAAEELRLLTKHSMENRIIIGQCGVIVPLLSLLYSDKKLTQEHAVTTLLNLSINEDNKVLIAEAGAIEPLIYVLKTGNDGAKENSAAALFSLSVIENNKEKIGRSGAVKALVNLLGSGTLRGKKDAATALFNLSIFHENKARMVQAGAVKYLVQLMDPADRMVDKAVALLANLSTIAEGRLAIAREGGIPSLVELVESGSPRGKENAASILLQLCLHSPKFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRSQREGATGKGKS 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00630 794 SUPERFAMILY ARM repeat 508 781 IPR016024 -
Bach8g00630 794 Coils Coil 201 233 - -
Bach8g00630 794 MobiDBLite consensus disorder prediction 458 481 - -
Bach8g00630 794 FunFam RING-type E3 ubiquitin transferase 253 331 - -
Bach8g00630 794 Pfam Armadillo/beta-catenin-like repeat 623 659 IPR000225 GO:0005515
Bach8g00630 794 Pfam Armadillo/beta-catenin-like repeat 579 618 IPR000225 GO:0005515
Bach8g00630 794 Pfam Armadillo/beta-catenin-like repeat 540 577 IPR000225 GO:0005515
Bach8g00630 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 631 673 IPR000225 GO:0005515
Bach8g00630 794 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 332 IPR013083 -
Bach8g00630 794 SMART Ubox_2 261 324 IPR003613 GO:0004842|GO:0016567
Bach8g00630 794 MobiDBLite consensus disorder prediction 460 481 - -
Bach8g00630 794 Pfam U-box domain 258 329 IPR003613 GO:0004842|GO:0016567
Bach8g00630 794 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842|GO:0016567
Bach8g00630 794 CDD RING-Ubox_PUB 259 311 IPR045210 -
Bach8g00630 794 PANTHER U BOX DOMAIN-CONTAINING 51 782 - -
Bach8g00630 794 FunFam RING-type E3 ubiquitin transferase 494 787 - -
Bach8g00630 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 672 713 IPR000225 GO:0005515
Bach8g00630 794 Gene3D - 494 788 IPR011989 -
Bach8g00630 794 Coils Coil 513 533 - -
Bach8g00630 794 SMART arm_5 661 700 IPR000225 GO:0005515
Bach8g00630 794 SMART arm_5 620 660 IPR000225 GO:0005515
Bach8g00630 794 SMART arm_5 579 619 IPR000225 GO:0005515
Bach8g00630 794 SMART arm_5 538 578 IPR000225 GO:0005515
Bach8g00630 794 SMART arm_5 701 741 IPR000225 GO:0005515
Bach8g00630 794 SMART arm_5 743 783 IPR000225 GO:0005515
Bach8g00630 794 SUPERFAMILY RING/U-box 256 332 - -
Bach8g00630 794 MobiDBLite consensus disorder prediction 772 794 - -
Bach8g00630 794 MobiDBLite consensus disorder prediction 385 411 - -
Bach8g00630 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 590 632 IPR000225 GO:0005515
Bach8g00630 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 549 591 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00630 Bach-Chr8 4139931 4144538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00630 24 794 U-box Gene Family AT3G54790 55.058 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00630 - - gmx:100800949 1032.71