Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00626 TGTCACTCCATTTTCTCCTAAACCAAAGTCCAAACCAGCTCCGGTGAATTTGTTGGATTCTTATTGTTAGTATTATTATTTTCAGCCCAGCATATTCTAATTCTATCCCCTGACCTTTTGAACCGTAATCGAGTTTCGAGAATTCTTAACTAGTTTTTCTTACATGGACGAAGAAGATAAACCCCAATTTCTGCTTCTACTCACTTGCTGAACCTTAGCTTCAATTTCGGAATTTCCCCGGGAAATTTCCCCTCTGTACTCTCTGCATAAACTTCAGAGCTCAAATTAGGGTTTCTTAAACCCAAATCATGCCGTCTCTAATGTCTCCGGGGAAAATCCATCGCTTAGAGATGGAGAACTTCAAGTCCTACAAGGGCTTTCAAGTAATCGGCCCCTTCTATGATTTCACCGCAATTATTGGCCCCAATGGTGCTGGCAAGTCGAACCTCATGGACGCCATTAGTTTTGTACTCGGTGTAAGGACAGGCCAGCTTCGTGGGGCTCAATTGAAGGACTTAATCTATGCTTACGACGACAAGGAAAAGGAGCAGAAGGGAAGGAGGGCGTTCGTGCGTTTGGTTTATCAGTTAGCTAACGGGTCAGAGATCCAATTCACCAGGACCATCACTAGCTCGGGTGGGAGCGAGTACCGGATAGATGGCAACATTGTAACGTGGGATGTATATAATACTAGACTCAAGTCGCTTGGGATTCTTGTCAAGGCTCGCAATTTCTTGGTGTTTCAGGGTGATGTGGAATCCATTGCGTCTAAAAATCCAAAAGAGCTTACTGCCCTTCTTGAGCAGATATCTGGCTCTGATGAGCTCAAGAGAGACTATGAGCAATTTGAAGAAGAAAAGACCAGAGCTGAAGAAGCATCAGCTCTTGTCTATCAGAAGAAGAAGACTGTAGTTATGGAGAGAAAGCAAAAGAAAGAACAAAAGGAAGAAGCAGAGAAACATCTGCGTTTGCAAGATCAACTGAAATCTTTAAAGAAAGAGCATTTCCTGTGGCAGTTGTTCACTATAGAAAAAGATATTGCAAAGATGACTGACGATCTTGACGATGATAGAAAAAATCGTGAAGTTGTCATGGAAGAACTAGAAAATTTTGAAGCTGAAGCAGGTAAAAAGAGGAAAGAACAGGCCAAATATCTGAAAGAGATTGGGATGCTTGAGAAGAAAATTGCCGAGTTAAGCAACAAACTTGACAAAAACCAACCTGAGCTTCTGAAGTGGAAGGAGGAAATGACTCGAATAAATTCAAAAATCAAAAAAGGGAAAAAGGAGCTTGATAGAAAAAGAGCAGAAAGGAAGAAGCATACAGCTGATATAGCAGAGCTGCACAGGGGCATAAAAGATTTGACAGCAAAACTGGAAGATCTACAAGCCAAGGGTAGACACGTTGGTGAGGAACTAAAGTTAGATGAAGTTGACTTGGAAAAGTATTTTAGAATCAAAGAGGAAGCTGGGATGAAAACTGCAAAGCTTAGAGATGAGAAAGAGGTTCTGGATAGGCAACAACATGCTGATACTGAAGCTCAAAAAAATTTGGAAGAAAATCTTCAACAGTTAAGGAATAGGGAGTCTGAACTGAATTCACAGGAAGCACAAATGCGAACAAGGCTGAAAAAAATCCTTGATAATTTTGGAAAACAAAAGGATGACCTTGCAAACTTGAAAAAAGAATTGCGTGTGATGCAGGACAAACATCGAGATTCCAAAATCAAATATGAAAATCTGAAGTTAAAAATTGGTGAGATAGAAAATCAATTGCATGAATTGAGGGCTGATAGATATGAAAATGAGAGAGATGCTAAATTGTCTCAGGCAGTGGAGACTCTCAAACGCCTGTTTCAAGGAGTCCATGGTCGCATGACTGACCTATGCCGGCCAACGCAGAAGAAGTATAATCTAGCTGTTACTGTTGCTATGGGTAAATTTATGGATGCAGTTGTAGTTGAGGATGAAAACACTGGAAAGGAATGCATCAAGTATTTGAAAGACCAAAGGCTTCCTCCTCAGACATTTATTCCTCTGCAATCAGTTCGTGTGAAGCCAATATTTGAAAGATTGCGCACATTAGGTGGTACCGCAAAGCTGGTTTTTGATGTCATTCAATATCCTTTTCCACTAATGGACATTGGCTGCATTTTTGATCCTGCCCTGGAGAAGGCAATTCTCTTTGCGGTTGGGAATACTCTTGTTTGTGATGATCTTGAGGAGGCCAAAGTTTTGAGCTGGACTGGTGAGAGGTTCAAAGTTGTGACCGTGGATGGGATTCTGTTGACAAAGTCTGGCACAATGACTGGTGGCACTAGTGGTGGAATGGAGTTAAGGTCAAAACAGTGGGATGACAAAAAGATTGAAGGACTTAAAAAAAAGAAAGAACAGCTTGAAGCTGAGTTGGAAGAGCTGGGATCAATAAGAGAAATGCATCTTAAGGAGTCTGAAGCTTCTGGAAAAATTAGTGGGCTTGACAAGAAGATCCACTATGCTGATATCGAAAAGAAAAGCATTGAAGACAAACTTATGAATTTGAGGGCAGATAAAGAGAAAATCAAAGGAGAAATTGGTCGTTTGAGTCCTGAACTTCAGAAGTTAAATGATGCTGTTAATCAGAGGAATGATGAAATAGGTGAGCTGGAGAAGGAAATCAACAAAATTACTGATAAGATTTACAAAAACTTTAGCAAGTCAGTTGGAGTAGCAAACATCCGGGAGTATGAAGAAAACCAACTCAAGGCTGCTCAAAATGTGGTAGATGAGAGGCTAAACTTGAAAAGCCAACTATCAAAATTAAAATATCAGTTGGAGTATGAGCAAAATCGGGATGTTAGTTCGCGAATAGAAGAACTGGAAACTTCTCGAGGTACTTTAGAACGTGATTTAAAACAGGTACAGAACAAAGAGGCTGAAGTGAAGTTAGCAGCTGAGAAAGCTACTGAAGAGATTATTAAGTTGAAAGAAGATGTTCGCGAGTTGAAATCAAAATCCGAAGATTGTGAGAAGGATATCCAAGAGTGGAAGAAACGGGCTTCTTCAGCCACAACAAGCATATCCAAACTTACTCGTCAGATTAACTCCAAGGAGGCACAGATTCAGCAGTTAATTTTACGGAAGCAGGAAATATCAGAGAAGTGTGAACTAGAACAGATTAGTCTTCCCACTATCTCTGATCCAATGGAAACTGAATCCTCTATACCAGGTCCAGTTTATGACTTTGATCAATTAAGTAGGACACTGAAGGACAGGAGGCAGTCTGACAGGGATAAAATTGAGATGGAATTTAAGCAAAAAATGGATGGCTTAATATCTGAAATTGAAAGAACGGCACCAAATTTGAAGGCACTGGACCAATATGAAGTTCTGCTAGAAAAAGAAAGAGCTGTTGTTGAAGAGTTTGAAGCTGTTAGGAAAGACGAGAAGGAAAAAGCTGATCGGTTCAATTCAGTTAAGCAAAGGAGGTACGAGCTGTTCATGGATGCTTTCAACCATATATCTGGTATTATAGATAAAATTTACAAACAACTTACAAAGAGCCCCACACATCCACTGGGTGGAACAGCCTATTTGAACCTGGAAAATGAAGATGATCCATTTCTACATGGTATTAAGTATACTGCTATGCCCCCAACGAAGCGCTTTCGTGATATGGACCAGCTGTCTGGTGGGGAGAAGACTGTTGCAGCACTTGCGTTGCTATTCTCCATCCACAGTTATAAGCCTTCACCATTTTTTATATTGGACGAAGTGGATGCTGCATTGGATAACTTGAATGTCGCCAAGGTTGCTGGTTTCATCCGTTCCAGATCTTGTGAAGGGGCAAGGACTAGCCAGGATGCTGATGGTGGCAATGGTTTCCAAAGTATTGTGATATCGCTGAAAGATAGCTTTTATGACAAAGCTGAAGCATTGGTTGGAGTTTACAGAGACTCAGAAAGAAGTTGTTCAAGAACTCTGACATTTGACCTGACCAAATACCGGGAATCATCAAATTCAAATCCTACTACATGATACGGTGGAATAACTTCGTGCCTTGTACATCAATCACTTTAACATATTAAATTTGAACCCATTACCGCTACGACTTATGTTGAAGTAGCTAGTTCAGTTCATTATTAAAATTATTGTAAATAGAACTGATTCTCATAACATGTGCTTGCTTTCTATTGCTGGGGTTGATGTAGAAGAAAATAGCTAGATGACTAACAGCTTTATTGGGTAAATATGTTGTTTTATTCCTTAAAAGTTTTTTAGTTTACAGCTTCCGGCCCCTTCTTACCTGTCGAAATGCAACTGCTCAGTACTAGAATTTGGAAAATGGAGATAAGAAATGGTGATGAAGCTTGCCGATGGCCGTCTTTAAGAGCGTTTATAATTTAGCATGCGTCTGCTCCGCTACTTTGTACCCTTTCTCCCTCTCCTCTTCACCACCCACAACATTTTTCCTGTAGTATGTTCCCATCTTTAATTTTTCTCTTTTAATTGTGGGGTTGGAGGCTTTATGAGTGTGAAG 4518 0.4026 MPSLMSPGKIHRLEMENFKSYKGFQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAYDDKEKEQKGRRAFVRLVYQLANGSEIQFTRTITSSGGSEYRIDGNIVTWDVYNTRLKSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYEQFEEEKTRAEEASALVYQKKKTVVMERKQKKEQKEEAEKHLRLQDQLKSLKKEHFLWQLFTIEKDIAKMTDDLDDDRKNREVVMEELENFEAEAGKKRKEQAKYLKEIGMLEKKIAELSNKLDKNQPELLKWKEEMTRINSKIKKGKKELDRKRAERKKHTADIAELHRGIKDLTAKLEDLQAKGRHVGEELKLDEVDLEKYFRIKEEAGMKTAKLRDEKEVLDRQQHADTEAQKNLEENLQQLRNRESELNSQEAQMRTRLKKILDNFGKQKDDLANLKKELRVMQDKHRDSKIKYENLKLKIGEIENQLHELRADRYENERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECIKYLKDQRLPPQTFIPLQSVRVKPIFERLRTLGGTAKLVFDVIQYPFPLMDIGCIFDPALEKAILFAVGNTLVCDDLEEAKVLSWTGERFKVVTVDGILLTKSGTMTGGTSGGMELRSKQWDDKKIEGLKKKKEQLEAELEELGSIREMHLKESEASGKISGLDKKIHYADIEKKSIEDKLMNLRADKEKIKGEIGRLSPELQKLNDAVNQRNDEIGELEKEINKITDKIYKNFSKSVGVANIREYEENQLKAAQNVVDERLNLKSQLSKLKYQLEYEQNRDVSSRIEELETSRGTLERDLKQVQNKEAEVKLAAEKATEEIIKLKEDVRELKSKSEDCEKDIQEWKKRASSATTSISKLTRQINSKEAQIQQLILRKQEISEKCELEQISLPTISDPMETESSIPGPVYDFDQLSRTLKDRRQSDRDKIEMEFKQKMDGLISEIERTAPNLKALDQYEVLLEKERAVVEEFEAVRKDEKEKADRFNSVKQRRYELFMDAFNHISGIIDKIYKQLTKSPTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMDQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSRSCEGARTSQDADGGNGFQSIVISLKDSFYDKAEALVGVYRDSERSCSRTLTFDLTKYRESSNSNPTT 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00626 1235 Coils Coil 679 713 - -
Bach8g00626 1235 Coils Coil 170 190 - -
Bach8g00626 1235 Coils Coil 251 299 - -
Bach8g00626 1235 Coils Coil 405 495 - -
Bach8g00626 1235 CDD ABC_SMC1_euk 10 157 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Bach8g00626 1235 Gene3D - 232 388 - -
Bach8g00626 1235 SUPERFAMILY Smc hinge domain 481 693 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach8g00626 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 1209 IPR027417 -
Bach8g00626 1235 Coils Coil 840 944 - -
Bach8g00626 1235 Coils Coil 762 789 - -
Bach8g00626 1235 Gene3D - 8 200 IPR027417 -
Bach8g00626 1235 Gene3D - 954 1227 IPR027417 -
Bach8g00626 1235 Coils Coil 1015 1042 - -
Bach8g00626 1235 SMART SMC_hinge_2 517 644 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach8g00626 1235 FunFam Structural maintenance of chromosomes 1A 9 224 - -
Bach8g00626 1235 Pfam RecF/RecN/SMC N terminal domain 10 1210 IPR003395 -
Bach8g00626 1235 Coils Coil 198 231 - -
Bach8g00626 1235 Pfam SMC proteins Flexible Hinge Domain 517 642 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Bach8g00626 1235 Coils Coil 314 369 - -
Bach8g00626 1235 Gene3D - 479 588 - -
Bach8g00626 1235 Coils Coil 734 754 - -
Bach8g00626 1235 PIRSF SMC 8 1227 IPR024704 GO:0005524|GO:0016887
Bach8g00626 1235 Gene3D - 589 670 - -
Bach8g00626 1235 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 10 1229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00626 Bach-Chr8 4114117 4125114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00626 8 112 Structural Maintenance of Chromosomes family AT5G61460 34.821 2.89e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00626 K06636 - gmx:100785315 1908.65