Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00617 ATGTCTCATTTCTCTCGCATTCAGAGCTTGACTGCAATGAATCAGAACCCCTCATACAAGCTTGGATATCAAGCTCTACAACCCATAAATTATTACCCACAATCACAACCACAATATGCTTCAGACTCTGCTTTTCCCATATTTGCCATTGTTGTGGTAAGCATCATGGCCACAGTTTTGTTACTCATCAGCTACTTTACTTTTGTCACCAAATGCTGCTCAAACTGGCATCAAGTTAATCCATTGAGATGGATTTCTGTCCTGCGAGCACGACATGAAGAAGATCCCTTGATAGCACTCTCCCCCAGCACGTGGAATCGTGGCCTTGATGAATCTGTCATCAGGGAAATCCCAAGCTTTCAATTCGTAAAAGGGGTAGGTAAGAATGAGGATGAGGATCAAAGTGTGTATGGCTGCGTGGTTTGTTTGACTGAATTTCAACAACATGATATGCTGAAGGTTCTTCCCAATTGCAGCCATACATTTCACTTGGACTGCATTGACATTTGGCTTCAGACCAATGCCAATTGCCCACTTTGCAGATCAAGTATTTCAGGCGCCACGCGTTCCCCGATGGACCACATCATAGCACCAAGCTCTTCTCCTCAAGATTCTCAATTGCTCTCGAACATGGGCAGTGATGAAGATTTTGTAGTCATTGAATTGGGGGGAGGCGAACATGGGGGAATGTCGCCACAGAGGCAACAAGAGAGGAATGACTCGAGAGGGAGCTTAACACAGAGTACCAGTAACTCTACAACAAGGAAGATGGAACACAAATTAGGAAACTTGAAACCAAAGAAGTGCCATCATGTTTCCATCATGGGTGATGAGTGTATCGATGTCAGAAAGAAAGATGACCAGTTCTCTATTCAACCCATTCGAAGATCATTCTCAATGGACTCTGCAACTGATAGACAAGCCTATTTGGATGTTCAAGCAACTTTACGACGAAATAGGCATCAAAATGAAGCCAGTGCAAGCGAAGACGGTATTACTATTAGCAGAGGTCGAAGATCATTCTTTTCTTTTCGTTATGGTCGGGGATCAAAAAATGCAGTCCTTCCTTTGGAGTTTGGAGAATGA 1086 0.4355 MSHFSRIQSLTAMNQNPSYKLGYQALQPINYYPQSQPQYASDSAFPIFAIVVVSIMATVLLLISYFTFVTKCCSNWHQVNPLRWISVLRARHEEDPLIALSPSTWNRGLDESVIREIPSFQFVKGVGKNEDEDQSVYGCVVCLTEFQQHDMLKVLPNCSHTFHLDCIDIWLQTNANCPLCRSSISGATRSPMDHIIAPSSSPQDSQLLSNMGSDEDFVVIELGGGEHGGMSPQRQQERNDSRGSLTQSTSNSTTRKMEHKLGNLKPKKCHHVSIMGDECIDVRKKDDQFSIQPIRRSFSMDSATDRQAYLDVQATLRRNRHQNEASASEDGITISRGRRSFFSFRYGRGSKNAVLPLEFGE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00617 361 Pfam Ring finger domain 139 181 IPR001841 -
Bach8g00617 361 MobiDBLite consensus disorder prediction 222 259 - -
Bach8g00617 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 186 IPR013083 -
Bach8g00617 361 MobiDBLite consensus disorder prediction 232 257 - -
Bach8g00617 361 SMART ring_2 139 180 IPR001841 -
Bach8g00617 361 CDD RING-H2_EL5-like 139 181 - -
Bach8g00617 361 PANTHER RING-H2 FINGER PROTEIN ATL16 32 357 IPR044600 GO:0016567|GO:0016740
Bach8g00617 361 SUPERFAMILY RING/U-box 138 185 - -
Bach8g00617 361 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00617 Bach-Chr8 4041378 4042463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00617 40 321 C3H Transcription Factor Family AT1G04360 46.711 8.97e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00617 K19041 - gmx:100809883 469.929