Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00615 ATGAGTTCCTCGGAGTCTCCTTCTATACCCTTTAGATGTAAGAAGCCCCATCTTTACCACACTGCCTCTAAATCCAAATCACCAGATTCCGTTCAATTGAGCTCCAAAACACCAGAGAAGCCGCCGCAGTTCTCAAATCGTTCACGCAACCGTGGCGTTGCTCTCTCCATCAAAGAAATCAGGAAGGTTGCTCAAACCCTTCAGGAAAGGAATCACGAGCAACATCATGATCCGACGGCGCAGATCAAATCTGCTAGAAGGAAGATTACAATGTTGTCTCCCTGTAAATCCAAGGCTCCGGTTGATGAGCCCACCAAGCTGCCGGAAAAGTATGAAATATTGGCCGAGTTCTTCGATAGTTTGGATAGTTCGATTCGGTTATTGCGTTTGAAAGGGTCGACCCCAACTTTCACGAATATTTGCCCAAAGATTCAATGCTTAACTGATAGGAGGTTTACTCATGGGCACTTGGCCCAGTTGAAGTTTATCTTACGTGAGGCAATTGTTATAAAGAAGGTACTTATGTTAGATGAACGGACAAGTTGTATGAAGCCAGACCTTCATATTACTTTAAACACTGATGCGATAGAATCTGATGCAAAATTGCTCTCTAAATCTGGAAGTATGTCACTGAGGAAGTTTGTTCGCACATGGCTCAGAGATTTTCTTAAATCCCATCCTGAGGGTGGTGAAATTCCAGAAGAGATGTTGCCTGAACCATTCAATCGCCCAAAGCAAGACCATTCAGACTCGATGAAGGTTTCCTCATCATCATTCCCTACAGGGGCATCATCTGGCGTATGTGCAGCTCATCCTTCAGCATTGTCAACTTGCTTGCAGGATAATGGAACTCCATATAAACAAGAACTTGCTTATGATAATCACAAAAATCAGGATTTGACGTCAAGCATAAAAAGTGGAGAAAACTTGTCAATATCTGTCAAGATGTCTATTGAAGCACTTAACCAGCCGTCAGCAGTAGCCACTCATATGTCTCCATTTTTTCAAAAGCGCTTTTCTCAGAAATCTGTGAGAAATGAAGCTAGTAGTGCACAGAAAAAATTGACGTCAGATTCATTCCAACCTCCAGCATTTCCAGTTTCAGAGTCAAGCCTGAAGAAAAAATCTTCCTATAAGGAAACTAGATCTCATCCCAATTCATCCTTATCTAAGTTGGTCTTAGAAGCAGTCAGTAATGAAAAATCACCAACAATTTGTGCTTCTCCAAACCGTTTCATATCATCAGGTGTTCCAGCTGCCACTCCAAGAAAAACCACTGAGTATTCGGAGAATGAAGATGGTTCTGTCGAAGACATTGCTACTATGTCAACTCCAGCTAAACTTGCTTCTACTCCATCTAGGCTTATGACTGTTACTCCTTCACTACCTCCGCCAAAGAGATGTTACATGAGCCCTGATGACAACTCTTCTAGCTCGCCAAACAAATTGCTTAGGCGTCCGCCTCGATCAAGATCATTGAAATTTGACACTCCGGTGAAGAATAAGGAGATTGAGAGTGGATGTGATGATGCTGAAAGCATATCAATTGACAAAGATATTTTTGACATTCTCCCAGAGAATCTTCTCCAGTCGATTAGAGAAAAGGAAAAAATAGCAATGGAGGAAAGAAATCCAGCCATCTCACGAGCCAAGAGGCGACAGAAGATGGTTGCTAGTCTCCCTAAACTCTTTAACATGATTCATCTTTTGTTTCATTCAATAAGCCGTTCTGTTATCACAAAAGAGGAGCTTGTAAGCAAGATAATATCAAGCCATTGTGACATTGTCGACAGAAGTAAGGCACTATATATGCAAATGATTTGCTATTCAATAGTTTCCATTGTGCTAAATTCCTGGTTTGTCATCTCAGGGGAAGTGGAAGAACAGCTGAATTTGTTGCTAGAACTAGTTCCAGAATGGATTTCTGAAACGAAGGCATCTAGCGGGGATTTGCTTTTCAGAATAAACAAAATGTTGAACGCCGAGACTATGCGCTCGAGGCTTGAAGAAGCAAAATGA 2019 0.4175 MSSSESPSIPFRCKKPHLYHTASKSKSPDSVQLSSKTPEKPPQFSNRSRNRGVALSIKEIRKVAQTLQERNHEQHHDPTAQIKSARRKITMLSPCKSKAPVDEPTKLPEKYEILAEFFDSLDSSIRLLRLKGSTPTFTNICPKIQCLTDRRFTHGHLAQLKFILREAIVIKKVLMLDERTSCMKPDLHITLNTDAIESDAKLLSKSGSMSLRKFVRTWLRDFLKSHPEGGEIPEEMLPEPFNRPKQDHSDSMKVSSSSFPTGASSGVCAAHPSALSTCLQDNGTPYKQELAYDNHKNQDLTSSIKSGENLSISVKMSIEALNQPSAVATHMSPFFQKRFSQKSVRNEASSAQKKLTSDSFQPPAFPVSESSLKKKSSYKETRSHPNSSLSKLVLEAVSNEKSPTICASPNRFISSGVPAATPRKTTEYSENEDGSVEDIATMSTPAKLASTPSRLMTVTPSLPPPKRCYMSPDDNSSSSPNKLLRRPPRSRSLKFDTPVKNKEIESGCDDAESISIDKDIFDILPENLLQSIREKEKIAMEERNPAISRAKRRQKMVASLPKLFNMIHLLFHSISRSVITKEELVSKIISSHCDIVDRSKALYMQMICYSIVSIVLNSWFVISGEVEEQLNLLLELVPEWISETKASSGDLLFRINKMLNAETMRSRLEEAK 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00615 672 Gene3D - 517 672 IPR038090 -
Bach8g00615 672 MobiDBLite consensus disorder prediction 1 52 - -
Bach8g00615 672 SUPERFAMILY "Winged helix" DNA-binding domain 101 241 IPR036390 -
Bach8g00615 672 MobiDBLite consensus disorder prediction 471 485 - -
Bach8g00615 672 MobiDBLite consensus disorder prediction 66 83 - -
Bach8g00615 672 CDD Cdt1_m 96 248 IPR014939 -
Bach8g00615 672 MobiDBLite consensus disorder prediction 23 52 - -
Bach8g00615 672 MobiDBLite consensus disorder prediction 345 372 - -
Bach8g00615 672 MobiDBLite consensus disorder prediction 229 250 - -
Bach8g00615 672 Pfam DNA replication factor Cdt1 C-terminal domain 527 645 IPR032054 -
Bach8g00615 672 MobiDBLite consensus disorder prediction 66 85 - -
Bach8g00615 672 MobiDBLite consensus disorder prediction 446 498 - -
Bach8g00615 672 Pfam DNA replication factor CDT1 like 107 174 IPR014939 -
Bach8g00615 672 SMART CDT1_2 107 239 IPR014939 -
Bach8g00615 672 PANTHER DNA REPLICATION FACTOR CDT1 16 672 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bach8g00615 672 MobiDBLite consensus disorder prediction 413 434 - -
Bach8g00615 672 MobiDBLite consensus disorder prediction 229 256 - -
Bach8g00615 672 CDD Cdt1_c 518 669 IPR032054 -
Bach8g00615 672 MobiDBLite consensus disorder prediction 345 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00615 Bach-Chr8 4035194 4038547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00615 443 670 Core DNA Replication Machinery Family AT2G31270 47.257 5.10e-51 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00615 K10727 - qsa:O6P43_006919 681.404