Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00594 GTTGAATCCAGTCTTCCCTGCTTCCAAACCTTACCCTTATCCTTCTCGAAGCGTTTCCTTCAGCCATGTCGACCGAAGAGCCCACTGTGGCGGTGGAGAATGCGCCAGAACCTGCGAATGCCGAGCCAGCTGAGGAAAAACAAGCCACCACCAAAGCTGGTAGGACCAAGAAAGCTAAGGAGCCTAAACCTAAAAAAGCTGCTCCTCCCAAATCTCGCAACCCTCCTTCGCACCCTTCTTATGAAGAGATGATCAAGGATGCGATTGTCACGTTGAAGGAGAAGACAGGTTCCAGCCAGTACGCGATTACAAAGTTCATTGAAGAGAAACACAAGCAACTTCCTTCCAACTTCAGAAAGCTCTTGTTATTCCATTTGAAGAAGCTTGTGGCTTCTGGCAAGATTGTGAAGGTGAAGGGCTCCTTCAAGCTTCCCCCTGCTAGGTCATCGGCGTCAAAGACAGTTTCGACTTCTTCTCCGGCGAAGAAGAAGCCTTTAGCTGCTAAACCAAAGCCTAAGCCAGCTTCCAAGCCTAAGGAAACGAAGAAGGCACCAGCTAAAGCGCCTGCTAAGGCTAAGGCAGCTACCAAACCAAAGCCTAAACCGGCTGTCAAGCCGAAGGCTGCTGCGAAGCCTAAAGCTGCTGCTAGGGCCAAGCCTGCTGCAAAACCGAAAGCTGCTGCTAAGCCAAAGGCAGCTGCAAAGCCGAAGCCAAAGGAGAGGCCCGCTAAAGCTTCAAGGACGTCAACTAGAACATCTCCAGGGAAGCGAGCCGCCGCTCCTAAACCGGCACCCAAGAAGGCAGCAGCTGCCAAAAAAGTTCCCGCTAAAACCGTTAAGCTGAAGAGTGTAAAGTCTCCGGCAAAGAAGGCTACACCGAAGAGAGGAAGGAAGTGAATTGTGTACCAGAGGCTAGTGTCTGTAGGGGTTAGTCTTGTAAAGTTCTTTGTCCTTGAGTTGTAGTTTGGAATCACAGTTGTCTTGTCCCTGAAAAATATGAAATCGAATTTTATTAAACCTTTTAAAGTTGTTTGAATTTATTTTTGTAATTTTCTTTTGACCTAGGAATTTTTCTATACAATTTCTATGTTGTATTCTTCAGTGTAATGATTTATGATAATGTAGTTAGAGCTTGAGGTTTT 1141 0.4689 MSTEEPTVAVENAPEPANAEPAEEKQATTKAGRTKKAKEPKPKKAAPPKSRNPPSHPSYEEMIKDAIVTLKEKTGSSQYAITKFIEEKHKQLPSNFRKLLLFHLKKLVASGKIVKVKGSFKLPPARSSASKTVSTSSPAKKKPLAAKPKPKPASKPKETKKAPAKAPAKAKAATKPKPKPAVKPKAAAKPKAAARAKPAAKPKAAAKPKAAAKPKPKERPAKASRTSTRTSPGKRAAAPKPAPKKAAAAKKVPAKTVKLKSVKSPAKKATPKRGRK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00594 276 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 55 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00594 276 MobiDBLite consensus disorder prediction 125 139 - -
Bach8g00594 276 FunFam Histone H1 50 135 - -
Bach8g00594 276 SMART h15plus2 53 119 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00594 276 PRINTS Histone H5 signature 179 196 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00594 276 PRINTS Histone H5 signature 42 63 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00594 276 PRINTS Histone H5 signature 145 159 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00594 276 PRINTS Histone H5 signature 69 86 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bach8g00594 276 Gene3D - 51 131 IPR036388 -
Bach8g00594 276 PANTHER HISTONE H1 24 260 - -
Bach8g00594 276 MobiDBLite consensus disorder prediction 1 63 - -
Bach8g00594 276 Pfam linker histone H1 and H5 family 56 122 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00594 276 SUPERFAMILY "Winged helix" DNA-binding domain 52 132 IPR036390 -
Bach8g00594 276 CDD H15 53 131 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bach8g00594 276 MobiDBLite consensus disorder prediction 151 165 - -
Bach8g00594 276 MobiDBLite consensus disorder prediction 113 276 - -
Bach8g00594 276 MobiDBLite consensus disorder prediction 261 276 - -
Bach8g00594 276 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00594 Bach-Chr8 3864460 3865704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00594 50 124 Single Myb Histone (SMH) Gene Family AT1G72740 33.333 1.46e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00594 K11275 - qsa:O6P43_006943 184.496