Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00587 ATGGCGAATCAAGTAGTGAAAGTAAAGAGGGATAATATTACAGCATGCATGACTTGCCCACTCTGCGACAAGTTGTTCACAGATGCCACCACTATCACTGAATGTCTTCATACGTTTTGCAGGAAGTGCATATATGATAAAATTACAGATGAGGAGTTAGAATGCTGCCCAATATGCAATATTGATTTGGGTTGTGTCCCTCTCGAGAAATTGAGGCCCGACCACATTTTGCAAGATTTGAGGGCTAAGATTTTTCCATTGGAGAAAACGAAGGAAAAGGCACCAGAAGTTGCTCCTTCTGTAACATTACCAGCTAGAAGAAAGGAGAGATCACTTTCATCTTTGGTAGTTAGCACTCCCAGAGTATCAGCCCAGGCAACCATGACAGGGCGAAGGACAAAACCTACAAGAAAGGCTAGTGGCCTGCGGACATCCACTTTTTCCATTGAGAAAAACGTTAAAAAAGAGGAAGAATCAGTGGAAGACCATTCAGACAGTTCAAGTTCGCCTGACATTTTGAACAAGTTTACTCAGAATAATGGACAGTCTTCGTCCCCTGGTGAAGCTAGCCAATCTACACCCAATAAAGAAACAGAAGATGCCGCTGAACAATGTGATGCAAAAGGGGACCTGTGGAAATCTTTGAATTGTTTAGTACAGGCTGCCACTAGCAGGAGTAAATCTCTCAAGTCTAACATGCAAGCATCTGATGGTAAACTAGAACAAATGCAAGTCAATGGTAGTGACTCTCAAGTGAAGAAATCCAAAAATAAGGAAAATAGGCGCAAGGCAAAAGTTGAGGATGAAAAGACTCGCACTGATCCTGTGTCATCAGATATGGCGAAACCCAATAAATTGCGCAGAGCTCGCCGGAAAAAGGAGTCTGTTTCTGGAGAAGTGGGCCTGTCACCCCAAGCTGTGCTGGATGCTACTAGTGCCAAACTCAAAAAAAGGACTGGTCCGATTTGGTTCACCTTGGTAGCTTCTGAAGACCAGGAAGGAGATGCACCATTACCGCAAATTCCTTCGAATTATTTAAGAATACAAGATGGAAGTGCACCTGTCTCATATGTTCAAAAATACCTGATGAAGAAATTAAATCTGGCCAGCGAAGACGAGGTTGAGATTAAATGTATGGGACAGCCAGTGGTTAATACACTGAAAATATATGATTTGATTGACTTGTGGCTGCAAACAGCATCCACACCAGAAAGAGTTCTAGCAACTGTTGGGTCCTCAGCGAAGGATTTTGTCATGGTGTTGACCTATGCTCGGAAGGTCCCAAATCCTTGA 1293 0.4308 MANQVVKVKRDNITACMTCPLCDKLFTDATTITECLHTFCRKCIYDKITDEELECCPICNIDLGCVPLEKLRPDHILQDLRAKIFPLEKTKEKAPEVAPSVTLPARRKERSLSSLVVSTPRVSAQATMTGRRTKPTRKASGLRTSTFSIEKNVKKEEESVEDHSDSSSSPDILNKFTQNNGQSSSPGEASQSTPNKETEDAAEQCDAKGDLWKSLNCLVQAATSRSKSLKSNMQASDGKLEQMQVNGSDSQVKKSKNKENRRKAKVEDEKTRTDPVSSDMAKPNKLRRARRKKESVSGEVGLSPQAVLDATSAKLKKRTGPIWFTLVASEDQEGDAPLPQIPSNYLRIQDGSAPVSYVQKYLMKKLNLASEDEVEIKCMGQPVVNTLKIYDLIDLWLQTASTPERVLATVGSSAKDFVMVLTYARKVPNP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00587 430 MobiDBLite consensus disorder prediction 224 298 - -
Bach8g00587 430 MobiDBLite consensus disorder prediction 252 284 - -
Bach8g00587 430 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Bach8g00587 430 MobiDBLite consensus disorder prediction 149 165 - -
Bach8g00587 430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 104 IPR013083 -
Bach8g00587 430 FunFam Polycomb group RING finger protein 3 3 105 - -
Bach8g00587 430 MobiDBLite consensus disorder prediction 96 204 - -
Bach8g00587 430 MobiDBLite consensus disorder prediction 166 198 - -
Bach8g00587 430 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Bach8g00587 430 SUPERFAMILY RING/U-box 13 85 - -
Bach8g00587 430 CDD RING-HC_PCGF 17 60 - -
Bach8g00587 430 MobiDBLite consensus disorder prediction 224 251 - -
Bach8g00587 430 MobiDBLite consensus disorder prediction 112 148 - -
Bach8g00587 430 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Bach8g00587 430 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 426 IPR044807 GO:0004842
Bach8g00587 430 SMART ring_2 19 59 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00587 Bach-Chr8 3828424 3833347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00587 2 349 C3H Transcription Factor Family AT2G30580 54.131 6.44e-114 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00587 K16277 - gmx:100793731 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00587 8 3828424 3833347 Bach1g02762 1 38255930 38261580 BWGD
Bach8g00587 8 3828424 3833347 Bach8g00587 8 3828424 3833347 ECH