Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00579 ATGGAAGTTGTTGTTTGTATGGAGAAGGAGAAGATGGGTTTTGAGGAAACAGAGCTGAGGTTGGGATTGCCTGGAAACAATGGAGCCAAGAAATTAGGTGGAGTCGGAGATGGAGATCAAGTGGTAAGGAAGAGAGCTTTCTCCGAAACTGAAACTAGTGATGATGAGACGACTACCACTGTGGATTTGATGCTTAACCTTTCTTCCAAGGAAGGCCATGCTGCTATTGCTAAAGCTGGTGGTGGATCAGATCCAACTCATGACAACTCCAACAATTTTCCTAAAGAGAAGACCCTTCTCCCTGCTGATCCAGCCAAACCTCCCCACAAGGCCCAAGTGGTGGGTTGGCCACCAGTGAGATCGTTCAGGAAGAACATTTTATCAGTGCAAAAGATCAGCGACAGCGGAGAGGAGAGCGAGAAAGAAAACCCTAACGGGAATGGAAGCTTTGTAAAAGTAAGCATGGATGGGGCACCTTACCTCCGCAAAGTGGACTTAAAGATGTACAAGTGTTACAAAGACCTCTCTGATGCTCTGGGCAACATGTTCAGCTCTTTCACCATTGGGAATTGTGGATCCCAAGGATTAATGAAGGATTTCATGAATGAGAGCAAGCTGATGGATCTCTTGAACAGCTCCGACTATGTTCCAAGCTATGAAGACAGGGATGGTGACTGGATGCTTGTCGGTGATGTCCCTTGGGAGATGTTTGTTGAATCATGCAAGCGTCTGCGTATCATGAAAGGAAAGGAGGCCATTGGACTTGCACCAAGAGCCATGGAGAAATGCAAGAACAGAACCTAG 804 0.4664 MEVVVCMEKEKMGFEETELRLGLPGNNGAKKLGGVGDGDQVVRKRAFSETETSDDETTTTVDLMLNLSSKEGHAAIAKAGGGSDPTHDNSNNFPKEKTLLPADPAKPPHKAQVVGWPPVRSFRKNILSVQKISDSGEESEKENPNGNGSFVKVSMDGAPYLRKVDLKMYKCYKDLSDALGNMFSSFTIGNCGSQGLMKDFMNESKLMDLLNSSDYVPSYEDRDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00579 267 ProSiteProfiles PB1 domain profile. 148 249 IPR000270 GO:0005515
Bach8g00579 267 Pfam AUX/IAA family 16 258 IPR033389 -
Bach8g00579 267 Gene3D - 143 261 - -
Bach8g00579 267 SUPERFAMILY CAD & PB1 domains 139 248 - -
Bach8g00579 267 FunFam Auxin-responsive protein 143 259 - -
Bach8g00579 267 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 254 IPR003311 GO:0005634|GO:0006355
Bach8g00579 267 MobiDBLite consensus disorder prediction 78 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00579 Bach-Chr8 3786023 3788133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00579 139 252 B3 DNA Binding Superfamily AT3G61830 30.702 3.57e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach8g00579 AUX_IAA 4e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00579 K14484 - gmx:100810013 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00579 8 3786023 3788133 Bach8g00579 8 3786023 3788133 ECH