Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00578 ATGGGGAAATATGAAAGTGAACTGAATCTGAAGGCCACAGAGCTAAGGCTGGGCTTGCCCGGAAGCGATGAGCCTGAGATACTTTCATGCACCAGTAGTAGTGTTAGAAGCAACAAGAGACCTTCACCGGAAACCGGTGAAGAGGAGTCTATAAACAAGAATGATCAAGAACAAGACAGTGCCCGCCAACCTGCAAAGGTGCAAGTAGTGGGATGGCCACCAGTCCGATCTCACCGGAAGAATGTTCTTGCTCATGATCAGCATGGGGATGGTTCTGGAAGGTACGTGAAAGTGAGCATGGCTGGTGCACCTTATTTGAGGAAGATAGATCTGAAGGTCTACAACAACTACCCAGAACTACTCATGGCCTTGGAGAACATGTTCAAGTGCTCATTTGGTGAATATTCAGAAAGGGAGGGTTACAATGGATCTGAATACGCTCCTACTTATGAAGACAAAGACGGTGACTGGATGCTCGTTGGAGATGTTCCCTGGGATATGTTCATGAGCTCCTGCAAGAGACTGAGAATCATGAAAGGATCAGAAGCGAAGGGCTTGGGTTGTTTATGAC 571 0.4729 MGKYESELNLKATELRLGLPGSDEPEILSCTSSSVRSNKRPSPETGEEESINKNDQEQDSARQPAKVQVVGWPPVRSHRKNVLAHDQHGDGSGRYVKVSMAGAPYLRKIDLKVYNNYPELLMALENMFKCSFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLGCL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00578 189 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 184 IPR003311 GO:0005634|GO:0006355
Bach8g00578 189 MobiDBLite consensus disorder prediction 41 60 - -
Bach8g00578 189 Gene3D - 88 189 - -
Bach8g00578 189 MobiDBLite consensus disorder prediction 16 66 - -
Bach8g00578 189 FunFam Auxin-responsive protein 88 189 - -
Bach8g00578 189 Pfam AUX/IAA family 45 187 IPR033389 -
Bach8g00578 189 MobiDBLite consensus disorder prediction 26 40 - -
Bach8g00578 189 ProSiteProfiles PB1 domain profile. 93 180 IPR000270 GO:0005515
Bach8g00578 189 SUPERFAMILY CAD & PB1 domains 90 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00578 Bach-Chr8 3778031 3778940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00578 96 186 B3 DNA Binding Superfamily AT2G46530 37.363 7.21e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach8g00578 AUX_IAA 1.4e-54 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00578 K14484 - gmx:100792134 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00578 8 3778031 3778940 Bach8g00578 8 3778031 3778940 ECH