Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00564 ATGAATTATCTGTACCCAGTGAAAGAAGAGTACCCGGAAGCATCTTCATCTCAATTAGGAGGTGACTCAGAAATGATTCCTCCGCCGCAGCCCATGGAGGGGCTTCACGATATAGGACCACTGCCATTCCTCACCAAGACCTTTGATGCGGTGGAGGACCCAACTACCAATTACATAGTTTCGTGGAGTAGAGCAGGGACTAGCTTCGTGGTTTGGGATCCACATGCTTTCTCTACGAATCTCCTTCCCAGATACTTCAAGCACAATAATTTCGCAAGCTTTGTAAGGCAATTAAATACTTATGGATTTAGAAAAATTGATCCAAATAAGTGGGAATTTGCTAATGAAGAATTCATCAGAGGCCACAGGCATCTTTTGAGGAACATAAGGAGAAGGAAAGTACCTTCTCGGCCAGGTCATTCCCAAGAAGCACAAGGTCCTTGTGTTGAAGTAGGCCAATTTGGACTCGATGAAGAAGTTGATCGCTTGAGGCGTGACAAGCAGGTGCTAATGATGGAACTTGTGAAGCTTAGACAGCAGCAGCAGAACACAAGAGCCTACCTTCAGGCAATGGAGCAGAGGTTACAAGGAACAGAAATGAAGCAGCAACAAATGATGGCTTTCTTAGCCAAGGCTATGAAAAATCCAACCTTTCTTCAGCAGCTAGTTCAGAACAAAGAGAAGAGAAAGGAGCTTGAAGAAGCCATGACCAAAAAGAGGAGAAGGCCAATTGAACAAGGGTCTAGCAGTGTTGCTATATCAAGCAGTAGTGGGGCAGAACAAAACCCAGTGAAAGTTGAACCACTTGAGCTTGGAGATTATGGGTTTGAAGTGTCAGAATTGGAGGTTCTAGCTATGGAAATGCAGGGTTATGGGAGGGGAAGAAGAGGAAAGGAGGAGGCAATAGAACCATCGGAAGAGCTGGACAAAGAACTAGATGAAGGGTTCTGGGAAGAACTGTTCAGTGAAAATTTCGAAGGTGAAGATGAAGATATCAATGTCTTGGCCAATCGCTTTGGTTACTTGGGTTCAAGCCCTAAATAG 1044 0.4464 MNYLYPVKEEYPEASSSQLGGDSEMIPPPQPMEGLHDIGPLPFLTKTFDAVEDPTTNYIVSWSRAGTSFVVWDPHAFSTNLLPRYFKHNNFASFVRQLNTYGFRKIDPNKWEFANEEFIRGHRHLLRNIRRRKVPSRPGHSQEAQGPCVEVGQFGLDEEVDRLRRDKQVLMMELVKLRQQQQNTRAYLQAMEQRLQGTEMKQQQMMAFLAKAMKNPTFLQQLVQNKEKRKELEEAMTKKRRRPIEQGSSSVAISSSSGAEQNPVKVEPLELGDYGFEVSELEVLAMEMQGYGRGRRGKEEAIEPSEELDKELDEGFWEELFSENFEGEDEDINVLANRFGYLGSSPK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00564 347 Coils Coil 222 242 - -
Bach8g00564 347 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Bach8g00564 347 FunFam Heat shock transcription factor 1 36 133 - -
Bach8g00564 347 MobiDBLite consensus disorder prediction 247 262 - -
Bach8g00564 347 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach8g00564 347 MobiDBLite consensus disorder prediction 1 26 - -
Bach8g00564 347 Gene3D - 38 133 IPR036388 -
Bach8g00564 347 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach8g00564 347 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach8g00564 347 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach8g00564 347 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 259 IPR027725 -
Bach8g00564 347 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach8g00564 347 MobiDBLite consensus disorder prediction 235 266 - -
Bach8g00564 347 Coils Coil 160 194 - -
Bach8g00564 347 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00564 Bach-Chr8 3655073 3656693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00564 22 345 HSF AT3G22830 51.934 1.58e-125 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach8g00564 HSF_DNA-bind 5.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00564 K09419 - gmx:100794264 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00564 8 3655073 3656693 Bach1g02792 1 38495354 38496935 BWGD