Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00559 CAACTACAAATTTTAGCATCTTGTTCAAGTTCTAGCGACCAACAATCTATTCGGGGAATGACATTTGTTGATGACATTAAGATGGTAAATTGAAATTTCAAATGGAGCAGTATGAAATTTTGGAACAGATCGGCAAAGGTTCCTTTGGCTCTGCTTTGCTTGTGAGACACAAGCATGAAAAGAAAAAGTATGTCCTCAAGAAGATACGCCTTGCCCGCCAAACTGATAGGACACGTAGATCTGCATATCAGGAGATGGAGCTTGTCTCTAAAGTGCGAAATTCATTTATTGTGGAGTATAAAGATTCCTGGGTGGAAAAGGGTTGTTTTGTATGCATTGTTATAGGCTACTGTGAAGGAGGAGACATGGCAGAAGCTATAAAAAAGGCTAATGGTGTTCACTTTTCTGAGGAGAAACTTTGTAAGTGGCTGGTTCAACTCTTGATGGCACTTGATTACTTGCATGCAAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATCTTCTTGACAAAAGATCAGGATGTTCGTCTAGGTGACTTTGGTCTGGCTAAAATTTTGACATCTGATGACCTTGCTTCCTCAGTTGTTGGTACTCCAACTTACATGTGCCCTGAGCTGCTTGCTGATATACCCTATGGCTCAAAGTCCGATATCTGGTCATTAGGATGCTGTATATATGAAATGGCTGCCCACAAGCCGGCTTTTAAAGCTTTTGATATTCAAGCTCTGATTAACAAAATAAACAAGTCTATAGTGGCTCCACTACCAACTATGTATTCTGGTTCTTTTCGAGGGCTCGTCAAAAGTATGCTGCGGAAAAATCCAGAGCTTAGGCCAAGTGCTGCAGAGTTGCTGAATCATCCGCATCTTCAGCCTTATATTATTAAAATTCACGTAAAATTGAATAGCCCCCGAAGAAGTACTTTTCCATTCCAATGGCCTGAGTCAAACTATGTAAGAAGAACAAGGTTTATGGAGCCAGGATCTGTTTCCACTATTTCTGACAGAGATAAACGGTTGTCGTTCAGCAATGACCGGACCTTAAATCCCAGTATTTGTGGAACTGAACATGATTCTCAATGTTCTACTCTCAGAGCAGATGAATCCTCCGTTTGTTTAAATTCAAAACTCTATGAAATATCTGTTGGCTGTGTCAGTGAAGAATGCAATACTAACAAGTCAAAAGCCACAAAGTTCTTAAATGTTGATAGGAGCCCGAGATTGAGAGCAGCCCAGGATTCTATCACCCCCAGGAGGCAGACGCCGCCATCAAATATATCCCGTACTGGCTCAAAACGTGATTCACTTCCGGTGTCTCATACAACTGCTGGAAAATCTTCCCTACGAACACGTCGAGCATCCCTTCCCTTGCCCACAAGGGCAATGGCCTCTGCAACCACATATAGAGCTAATGCGGGTCTCCTTCAAAGTGTGGACTCTCCAGATGTTTCTGTTAATGAACCAAGAATTGATAAGATTGCAGAATTCCCCTTAGCCTCTTGTGAGGATCCTCATCTCCCTGTTCATAGAACATCCTCAACATCCGCAAAGTGCTCTTCCAGTTCACCAGGGAGTGCTAACTGTTCCATCACAAAAGACAAGTGTACAATCCATGTTGTGGACAAAGCTAGCGCCCGTACCAGTGTCAGTGATGCTTGTCCTGGAGCTCCTCGATATGGGAGTGAATGCTCGGGGTACAATGTGACAACTGGTGTTTCAAGCCGTTCCTCTGGTGAGTCAAGACAACATCGGTTCGATACCTCATCGTACCAACAACGTGCTGAGGCATTGGAAGGTTTGCTTGAGTTCAGTGCACGGCTCCTTCAACAACGGAGATTTGAAGAACTGGGGGTGTTGTTGAAGCCATTCGGACTTGAGAAGGTTTCTCCGAGGGAAACAGCTATTTGGTTGACCAAGAGCTTCAAAGAAGCTGCTGTTCAAGAAGTTCTATGATTATCTTATGATCATTGACGTTTGACACCGTACATAAGTGTGCTTCCGTGTTTGACTGTAGAGTTTGAAGAGTTGCTTCCGGTGTGAGAACACTGTAGAAACTGAATTCTGAAATTTCTTCACGCCATTTTCCTTGAGATGTCCGCAGAACAAGATCTGATTCACATAAATGTTGATAATCCTGTGCGAACAACTAAGCTATAAAGACTGAACTGTGTCTT 2179 0.4286 MEQYEILEQIGKGSFGSALLVRHKHEKKKYVLKKIRLARQTDRTRRSAYQEMELVSKVRNSFIVEYKDSWVEKGCFVCIVIGYCEGGDMAEAIKKANGVHFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDVRLGDFGLAKILTSDDLASSVVGTPTYMCPELLADIPYGSKSDIWSLGCCIYEMAAHKPAFKAFDIQALINKINKSIVAPLPTMYSGSFRGLVKSMLRKNPELRPSAAELLNHPHLQPYIIKIHVKLNSPRRSTFPFQWPESNYVRRTRFMEPGSVSTISDRDKRLSFSNDRTLNPSICGTEHDSQCSTLRADESSVCLNSKLYEISVGCVSEECNTNKSKATKFLNVDRSPRLRAAQDSITPRRQTPPSNISRTGSKRDSLPVSHTTAGKSSLRTRRASLPLPTRAMASATTYRANAGLLQSVDSPDVSVNEPRIDKIAEFPLASCEDPHLPVHRTSSTSAKCSSSSPGSANCSITKDKCTIHVVDKASARTSVSDACPGAPRYGSECSGYNVTTGVSSRSSGESRQHRFDTSSYQQRAEALEGLLEFSARLLQQRRFEELGVLLKPFGLEKVSPRETAIWLTKSFKEAAVQEVL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00559 618 Gene3D Transferase(Phosphotransferase) domain 1 84 272 - -
Bach8g00559 618 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Bach8g00559 618 MobiDBLite consensus disorder prediction 382 421 - -
Bach8g00559 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Bach8g00559 618 MobiDBLite consensus disorder prediction 377 421 - -
Bach8g00559 618 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00559 618 FunFam Serine/threonine-protein kinase Nek3 86 333 - -
Bach8g00559 618 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 570 - -
Bach8g00559 618 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Bach8g00559 618 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bach8g00559 618 SUPERFAMILY Protein kinase-like (PK-like) 1 309 IPR011009 -
Bach8g00559 618 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00559 618 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00559 618 CDD STKc_Nek 3 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00559 Bach-Chr8 3611361 3617091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00559 10 259 MAP Kinase Kinase Kinase AT1G53570 30.980 3.29e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bach8g00559 Pkinase 2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00559 K08857 - qsa:O6P43_006993 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00559 8 3611361 3617091 Bach1g02805 1 38592876 38601673 BWGD
Bach8g00559 8 3611361 3617091 Bach8g00559 8 3611361 3617091 ECH