Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00494 ATGAAGGAGAAAGCGGATTCCCCTGTTGCAGTTCTAGAGGATTATTTTAAGAGCTCAGCTTCAGATTCAGAAACAAGTTCTTCCAAAGAACCCATTGAAGATTCAGATGGTCAAGATAAGCCAAAAACTGGTTCTAGATGGCGTGGATTTCTCCAATTGTTCAGGACCAAATCGATGAAACCCGTATCCACATTGCACCCTCTCAGTGTTCTCAAGCTGTCAAAAAAATTGAGCAGCAGCATGAGGGAAGTTATGATGTCAAATTATCGCTTAGATGCAGATTCCAACCACCACTCGTCTCCGTGGAAGATCTTTACTCAGCATGAGATACAAACTGCAACCAACAATTTCAGCCAAGAAAATTTGATTGGAAAGGGTGGCTATGCTGAAGTTTACAAAGGGTGTTTGCCAAACGGTCAGCTCATAGCAATTAAACGGCTAACAAGAGGAACACCAGATGAAATCATAGGGGACTTTTTATCAGAACTTGGCATAATGGCACATGTAAACCATCAAAACACTGCTAAATTAGTGGGCTATGGAGTGGAGGGAGGGATGCACCTTGTTCTTGAATTGTCTGAGAAAGGGAGCTTAGCTTCTGTGCTTTATGGTTTGAAAGAGAAACTACCATGGTGTATTAGGCACAAAATTGCACTGGGAACAGCAAAGGGTATGTTATATCTTCACGAGGGTTGTCAAAGAAGAATTATCCACAGAGATATCAAGGCTGCAAATATCTTGCTTACAGAGGAATACGAGCCTCAGATTTGTGATTTTGGGTTAGCAAAATGGCTACCAGAGAATTGGACTCACCACACCGTTTCAAAATTTGAAGGAACTTTTGGCTATCTTGCCCCTGAATACTTACTTCATGGCATAGTAGATGAGAAAACAGATGTGTTTGCCTTTGGTGTCCTGCTGTTAGAACTAGTCACTGGACGGCGAGCACTGGATTACTCACAGCAAAGCCTCGTTTTGTGGGCAAAACCATTGCTAAAGAAGAATGATATAAGGGAGCTCATTGATCCTTCTCTAGATAATGACTTTGACTCTCGGCAGATGAATCTGATGCTCTTGTCTGCTTCTCTATGCATACAGCAGTCATCAATTCGTCGCCCATCAATGAGACAGGCATGTAATCATTTGTTTTCCTCCCTTTTCTGA 1164 0.421 MKEKADSPVAVLEDYFKSSASDSETSSSKEPIEDSDGQDKPKTGSRWRGFLQLFRTKSMKPVSTLHPLSVLKLSKKLSSSMREVMMSNYRLDADSNHHSSPWKIFTQHEIQTATNNFSQENLIGKGGYAEVYKGCLPNGQLIAIKRLTRGTPDEIIGDFLSELGIMAHVNHQNTAKLVGYGVEGGMHLVLELSEKGSLASVLYGLKEKLPWCIRHKIALGTAKGMLYLHEGCQRRIIHRDIKAANILLTEEYEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQSLVLWAKPLLKKNDIRELIDPSLDNDFDSRQMNLMLLSASLCIQQSSIRRPSMRQACNHLFSSLF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00494 387 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 87 191 - -
Bach8g00494 387 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Bach8g00494 387 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 194 385 - -
Bach8g00494 387 MobiDBLite consensus disorder prediction 15 44 - -
Bach8g00494 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Bach8g00494 387 Gene3D Transferase(Phosphotransferase) domain 1 194 386 - -
Bach8g00494 387 SUPERFAMILY Protein kinase-like (PK-like) 97 383 IPR011009 -
Bach8g00494 387 SMART serkin_6 117 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00494 387 Gene3D Phosphorylase Kinase; domain 1 87 191 - -
Bach8g00494 387 ProSiteProfiles Protein kinase domain profile. 117 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00494 387 Pfam Protein kinase domain 118 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach8g00494 387 PANTHER OS08G0249100 PROTEIN 4 381 IPR046958 -
Bach8g00494 387 MobiDBLite consensus disorder prediction 27 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00494 Bach-Chr8 3158958 3160531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00494 104 383 Trihelix Transcription Factor Family AT1G68690 40.893 1.80e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bach8g00494 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00494 - - gmx:100780587 608.601