Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00478 ATGAAGAGAGGAAGAGAAAAGGAGGCTAGAGCCGCCGGTAACGACGGTTTTGTTCCTAATCCTGCTAAAAATGCTACCGGAATTCCAGAATGTAACCAAGGTGGTTTCCCCTCTCACTTTAACCATGACAAAGATGATTTGTACGATGAACTGTGGCACGCATGCGCCGGCCGCTCTGTTTGTGTTCCGCGTGCCGGCGAAAAGGTTTTCTACTTTCCTCAAGGTCACTTGGAACAGGTTGCTGCATTTGCTGATCAGCGAGAGGGTTACATGGAAATGCCTGTTTGTAATTTGCCTTCTAAGATCCTCTGCAGGGTAATGTGTGTTCAGCTCAAGGCAGAAGCTTACACAGATGAGGTTTTTGCACAAATTACTTTGCTTCCAGAACCGAAGCAAGATGAGCTTGGATCAGGGGACAGAAATACTTATCAGCTACCCTGCAGAGCTGGCTTTTGCTCCTTTAGTAAGACACTCACTCCATCGGACACAAGTACACATGGTGGATTCTCTATTCCTAAGAGACATGCCGACGAATGCTTCCCTTCTCTGGATATGTCTCAGCAGCCGCCATCACAAGAGCTGATTGCAAAGGACTTGCATGGCTTTGAGTGGCATTTTCGCCATATATTTCGTGATAATGAATGTGTCGGTAAGAAGGACATTGGTTTTATTCTCAGTGGGGAAAATGGAGAACTTCATATTGGGATCCGTCGAGCAGCGAAACAACACAAGAGTGCATCAATATCCACATCTGTGATATCTGGCCATAGCATGCAACTTGGAATATTGGCCAGTGCTTCCCATGCTATTGCTACAGGATCCATGTTCACTGTGTATTACCATCCTTGGACAAATCCGTCTGAGTTCATTATTCCATTGGATCTATATATGAAGTCCAGTGAAATGAACTACTCAATTGGAACAAGAGTGCAAATATGTCATCATGGAGCTGAAGAATATAGTAAACGGAGATATGCCGGTACCGTTGTTGGTGTTGAAGATATTGACAGCACTAGATGGCCTAATTCAGCATGGGGATGTCTCAAGGTGCAATGGGATGGCATACTAGATACATATATACATCCTGAACGAGTTTGTCCTTGGAGCATTGAACCCTTGGGATCCTCTAAGAAGAAACACATTCCTATTCTTCCCCTACCAAAGAGTGTACTTGATCCATCATTCCACCTATGTGGTTTTGCCAGGGAAGGGGGCTTACAAGGTCAAGATTACAATGATGCACAACCACCACCATTGTCAACAAATTTGCTTCTCCCATTAAACGTCACCTCTAGTGACTCACAGTTGGGGATGGAGAGCCAGCTGCAGTTTGTAACGCAAAACCCTTCCCACCAGTCTCTTGGCAGCTCAATATCATTTCCAGATGATAACATATCAACTTCAAGCCTCCCCAGTCGCGGTCCAATCTTCACCACTGATGTAAATAATGTCTCAGATAAGAGAGATATTTCAATCTCAAATGTGAACTCCAGTGATTCTGAATCCCAGGGATGGCGTGCTTCTGAATCTAGGGATGAGACTGAAGTTCTTTTTGGCCATCCTCATGGTTACAGTAAATACAAGCTTTTCGGGTTCAATTTAATTGATAACCACCCGGAGCTCCCTTCACCACAAGTTGCCGCTTTGAGCAAGATTCCAAGTCCGCCTTCTATTACTCCAATGTCCCAGTTAAGTGTTTCTGCAACTATCCCTGTATCAGAACCATCTAAGAGTATTTCAGGTGTTACCTCGAAGAAAGAAAACAAGAAATGGTGCTCTGTTAATAGTAGGAGTTGCACAAAGGTGCTTAAGCATGGAACTGCTCTTGGAAGATCCATTGACCTCACACGTTTTCCTGGATATGATGAACTCATTTCTGAACTTGATCAGATGTTTGCTTTTAGAGGAAGCTTGATAAACGGAAGCAGTGGGTGGCAGGGATTTCCAGTTCATGGTGCAGAAGATGATCATCCGTCCAAAGGAGGACATGGGGAAGATGAATGCTAG 2007 0.4444 MKRGREKEARAAGNDGFVPNPAKNATGIPECNQGGFPSHFNHDKDDLYDELWHACAGRSVCVPRAGEKVFYFPQGHLEQVAAFADQREGYMEMPVCNLPSKILCRVMCVQLKAEAYTDEVFAQITLLPEPKQDELGSGDRNTYQLPCRAGFCSFSKTLTPSDTSTHGGFSIPKRHADECFPSLDMSQQPPSQELIAKDLHGFEWHFRHIFRDNECVGKKDIGFILSGENGELHIGIRRAAKQHKSASISTSVISGHSMQLGILASASHAIATGSMFTVYYHPWTNPSEFIIPLDLYMKSSEMNYSIGTRVQICHHGAEEYSKRRYAGTVVGVEDIDSTRWPNSAWGCLKVQWDGILDTYIHPERVCPWSIEPLGSSKKKHIPILPLPKSVLDPSFHLCGFAREGGLQGQDYNDAQPPPLSTNLLLPLNVTSSDSQLGMESQLQFVTQNPSHQSLGSSISFPDDNISTSSLPSRGPIFTTDVNNVSDKRDISISNVNSSDSESQGWRASESRDETEVLFGHPHGYSKYKLFGFNLIDNHPELPSPQVAALSKIPSPPSITPMSQLSVSATIPVSEPSKSISGVTSKKENKKWCSVNSRSCTKVLKHGTALGRSIDLTRFPGYDELISELDQMFAFRGSLINGSSGWQGFPVHGAEDDHPSKGGHGEDEC 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00478 668 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 46 651 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach8g00478 668 Pfam Auxin response factor 266 349 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach8g00478 668 MobiDBLite consensus disorder prediction 653 668 - -
Bach8g00478 668 MobiDBLite consensus disorder prediction 1 24 - -
Bach8g00478 668 MobiDBLite consensus disorder prediction 446 475 - -
Bach8g00478 668 SMART B3_2 154 240 IPR003340 GO:0003677
Bach8g00478 668 CDD B3_DNA 153 238 IPR003340 GO:0003677
Bach8g00478 668 Gene3D - 303 379 - -
Bach8g00478 668 SUPERFAMILY DNA-binding pseudobarrel domain 149 267 IPR015300 -
Bach8g00478 668 Gene3D - 592 656 - -
Bach8g00478 668 Pfam B3 DNA binding domain 154 215 IPR003340 GO:0003677
Bach8g00478 668 Gene3D - 152 220 IPR015300 -
Bach8g00478 668 FunFam Auxin response factor 303 377 - -
Bach8g00478 668 MobiDBLite consensus disorder prediction 649 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00478 Bach-Chr8 3059126 3064353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00478 595 645 B3 DNA Binding Superfamily AT5G62000 54.902 8.15e-12 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach8g00478 Auxin_resp 1.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00478 - - pcin:129286310 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00478 8 3059126 3064353 Bach8g00478 8 3059126 3064353 ECH